Support - References - Publications
Listing of scientific publications referencing MO BIO products.
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- Zhang, L., Srinivasan, U., Marrs, C.F., Ghosh, D., Gilsdorf, J.R., Foxman, B.
Library On A Slide For Bacterial Comparative Genomics. BMC Microbiology. 4(12) (2004).
- Dandie, C.E., Miller, M.N., Burton, D.L., Zebarth, B.J., Trevors, J.T., Goyer, C.
Nitric Oxide Reductase-Targeted Real-Time PCR Quantification Of Denitrifier Populations In Soil.
Applied Environmental Microbiology. 73(13): 4250-4258 (2007).
- Boga, J.A., Melón, S., Nicieza, I., de Diego, I., Villar, M., Parra, F., de Oña, M.
Etiology Of Sporadic Cases Of Pediatric Acute Gastroenteritis In
Asturias, Spain, and Genotyping and Characterization Of Norovirus Strains Involved.
Journal of Clinical Microbiology. 42(6): 2668-2674 (2004).
- Clarke, B.R., Cuthbertson, L., Whitfield, C.
Nonreducing Terminal Modifications Determine The Chain Length Of Polymannose O Antigens Of Escherichia coli
and Couple Chain Termination To Polymer Export Via An ATP-Binding Cassette Transporter.
The Journal of Biological Chemistry. 279(34): 35709-35718 (2004).
- Fernandez, P., Carretero, J., Medina, P.P., Jimenez, A.I., Rodriguez-Perales, S., Paz, M.F., Cigudosa, J.C.,
Esteller, M., Lombardia, L., Morente, M., Sanchez-Verde, L., Sotelo, T., Sanchez-Cespedes, M.
Distinctive Gene Expression Of Human Lung
Adenocarcinomas Carrying LKB1 Mutations. Oncogene. 23(29): 5084-5091 (2004).
- Hara, T., Ishida, H., Raziuddin, R., Dorkhom, S., Kamijo, K., Miki, T.
Novel Kelch-Like Protein, KLEIP, Is Involved In
Actin Assembly At Cell-Cell Contact Sites Of Madin-Darby Canine Kidney Cells. Molecular Biology of the Cell.
15(3): 1172-1184 (2004).
- Kaniuk, N.A., Vinogradov, E., Li, J., Monteiro, M.A., C. Whitfield, C.
Chromosomal and Plasmid-encoded Enzymes Are Required
For Assembly Of The R3-type Core Oligosaccharide In The Lipopolysaccharide Of Escherichia coli O157:H7.
The Journal of Biological Chemistry. 279(30): 31237-31250 (2004).
- Kiefel, B.R., Gilson, P.R., Beech, P.L.
Diverse Eukaryotes Have Retained Mitochondrial Homologues Of
The Bacterial Division Protein FtsZ. Protist. 155(1): 105-115 (2004).
- Miller, W.L., Wenzel, C.Q., Daniels, C., Larocque, S., Brisson, J.R., Lam, J.S.
Biochemical Characterization Of WbpA, A
UDP-N-acetyl-D-glucosamine 6-Dehydrogenase Involved In O-antigen Biosynthesis In Pseudomonas aeruginosa
PAO1. The Journal of Biological Chemistry. 279(36): 37551-37558 (2004).
- Summerscales, J.E., Josephy, P.D.
Human Acetyl CoA: Arylamine N-Acetyltransferase Variants Generated By Random Mutagenesis.
Molecular Pharmacology. 65(1): 220-226 (2004).
- Zhang, Y., Champagne, N., Beitel, L.K., Goodyer, C.G., Trifiro, M., LeBlanc, A.
Estrogen and Androgen Protection Of Human
Neurons Against Intracellular Amyloid Beta1-42 Toxicity Through Heat Shock Protein 70.
Journal of Neuroscience. 24(23): 5315-5321 (2004).
- Adamson, T., Price, D.
Cotranscriptional Processing Of Drosophila Histone mRNAs. Molecular and Cellular Biology. 23(12):
4046-4055 (2003).
- Gomes, N.C.M., Fagbola, O., Costa, R., Rumjanek, N.G., Buchner, A., Mendona-Hagler, L., Smalla, K.
Dynamics Of Fungal Communities In
Bulk and Maize Rhizosphere Soil In The Tropics. Applied and Environmental Microbiology. 69(7): 3758-3766
(2003).
- Krüger, R., Filutowicz, M.
pi Protein- and ATP-Dependent Transitions From 'Closed' To 'Open' Complexes At The gamma
ori Of Plasmid R6K. Nucleic Acids Research. 31(20): 5993-6003 (2003).
- Lebrecht, D., Setzer, B., Ketelsen, U.P., Haberstroh, J., Walker, U.A.
Time-Dependent and Tissue-Specific Accumulation Of
mtDNA and Respiratory Chain Defects In Chronic Doxorubicin Cardiomyothapy. Circulation. 108(19): 2423-2429
(2003).
- Matthias, K., Kirchhoff, F., Seifert, G., Hüttmann, K., Matyash, M., Kettenmann, H., Steinhäuser, C.
Segregated Expression Of AMPA-Type Glutamate Receptors
and Glutamate Transporters Defines Distinct Astrocyte Populations In The Mouse Hippocampus.
Journal of Neuroscience. 23(5): 1750-1758 (2003).
- Partridge, S.R., Hall, R.M.
In34, A Complex In5 Family Class 1 Integron Containing orf513 and dfrA10.
Antimicrobial Agents and Chemotherapy. 47(1): 342-349 (2003).
- Partridge, S.R., Hall, R.M.
The IS1111 Family Members IS4321 and IS5075 Have Subterminal
Inverted Repeats and Target the Terminal Inverted Repeats Of Tn21 Family Transposons.
Journal of Bacteriology. 185(21): 6371-6384 (2003).
- Rios-Hernandez, L.A., Gieg, L.M., Suflita, J.M.
Biodegradation Of An Alicyclic Hydrocarbon By A Sulfate-Reducing Enrichment From A Gas Condensate-Contaminated
Aquifer. Applied and Environmental Microbiology. 69(1): 434-443 (2003).
- Rodríguez-Antona, C., Bort, R., Jover, R., Tindberg, N., Ingelman-Sundberg, M., Gómez-Lechón, M.J., Castell, J.V.
Transcriptional Regulation Of Human CYP3A4 Basal Expression By CCAAT Enhancer-Binding Protein alpha and Hepatocyte
Nuclear Factor-3 gamma. Molecular Pharmacology. 63(5): 1180-1189 (2003).
- Seguritan, V., Feng, I.W., Rohwer, F., Swift, M., Segall, A.M.
Genome Sequences Of Two Closely Related Vibrio
parahaemolyticus Phages, VP16T and VP16C. Journal of Bacteriology. 185(21): 6434-6447 (2003).
- Vellani, T., Myers, R. Bacteriophage SPP1 Chu Is An
Alkaline Exonuclease In The SynExo Family Of Viral Two-Component Recombinases.
Journal of Bacteriology. 185(8): 2465-2474 (2003).
- Zhang, Y., Hong, Y., Bounhar, Y., Blacker, M., Roucou, X., Tounekti, O., Vereker, E., Bowers, W.J.,
Federoff, H.J., Goodyer, C.G., LeBlanc, A.
p75 Neurotrophin Receptor Protects Primary Cultures Of Human Neurons Against Extracellular Amyloid Beta
Peptide Cytotoxicity. Journal of Neuroscience. 23(19): 7385-7394(2003).
- Brofft, J.E., McArthur, J.V., Shimkets, L.J.
Recovery Of Novel Bacterial Diversity From A Forested Wetland Impacted By Reject Coal.
Environmental Microbiology. 4(11): 764-769 (2002).
- Chan, R., Baldwin, B.G., Ornduff, R.
Cryptic Goldfields: A Molecular Phylogenetic Reinvestigation Of Lasthenia californica sensu lato and
Close Relatives (Compositae: Heliantheae sensu lato). American Journal of Botany.
89(7): 1103-1112 (2002).
- Huang, Y.C., Colman, R.F.
Evaluation By Mutagenesis Of The Roles Of His309,
His315, and His319 In The Coenzyme Site Of Pig Heart NADP-Dependent Isocitrate Dehydrogenase.
Biochemistry. 41(17): 5637-5643 (2002).
- McCormick, S., Alexander, N.
Fusarium Tri8 Encodes A Trichothecene C-3 Esterase. Applied and Environmental Microbiology.
68(6): 2959-2964 (2002).
- Potaman, V.N., Lushnikov, A.Y., Sinden, R.R., Lyubchenko, Y.L.
Site-Specific Labeling Of Supercoiled DNA At The A+T Rich Sequences. Biochemistry.
41(44): 13198-13206 (2002).
- Soldatenkov, V.A., Chasovskikh, S., Potaman, V.N., Trofimova, I., Smulson, M.E., Dritschilo, A.
Transcriptional Repression By Binding Of Poly(ADP-ribose)
Polymerase To Promoter Sequences. The Journal of Biological Chemistry. 277(1): 665-670 (2002).
- Cervelli, M., Cona, A., Angelini, R., Polticelli, F., Federico, R., Mariottini, P.
A Barley Polyamine Oxidase Isoform With Distinct Structural
Features and Subcellular Localization. European Journal of Biochemistry. 268(13): 3816-3830 (2001).
- Goodin, M.M., Austin, J., Tobias, R., Fujita, M., Morales, C., Jackson, A.O.
Interactions and Nuclear Import Of The N and P Proteins Of
Sonchus Yellow Net Virus, A Plant Nucleorhabdovirus. Journal of Virology. 75(19): 9393-9406 (2001).
- Grigg, M., Boothroyd, J. C. Rapid Identification Of
Virulent Type I Strains Of The Protozoan Pathogen Toxoplasma gondii By PCR-Restriction Fragment
Length Polymorphism Analysis At The B1 Gene. Journal of Clinical Microbiology. 39(1): 398-400 (2001).
- Grigg, M.E., Bonnefoy, S., Hehl, A.B., Suzuki, Y., Boothroyd, J.C.
Success and Virulence In Toxoplasma As The Result Of
Sexual Recombination Between Two Distinct Ancestries. Science. 294(5540): 161-165 (2001).
- Ito, N., Takayama, M., Yamada, K. Sugiyama, M., Minamoto, N.
Rescue Of Rabies Virus From Cloned cDNA and Identification
Of The Pathogenicity-Related Gene: Glycoprotein Gene Is Associated With Virulence For Adult Mice. Journal of
Virology. 75(19): 9121-9128 (2001).
- Kanamaru, K., Nagashima, A., Fujiwara, M., Shimada, H., Shirano, Y., Nakabayashi, K., Shibata, D., Tanaka, K.,
Takahashi, H. An Arabidopsis Sigma Factor (SIG2)-Dependent
Expression Of Plastid-Encoded tRNAs In Chloroplasts. Plant Cell Physiology. 42(10): 1034-1043 (2001).
- Krüger, R., Konieczny, I., Filutowicz, M. Monomer/Dimer
Ratios Of Replication Protein Modulate The DNA Strand-Opening In A Replication Origin.
Journal of Molecular Biology. 306(5): 945-955 (2001).
- Ohyama, K., Enn, P., Uchide, N., Bessho, T., Yamakawa, T.
Improvement of Separation Method Of Fragmented DNA
From An Apoptotic Cell DNA Sample For The Quantification Using Agarose Gel Electrophoresis.
Biological & Pharmaceutical Bulletin. 24(4): 342-346 (2001).
- Oussatcheva, E.A., Hashem, V.I., Zou, Y., Sinden, R.R., Potaman, V.N.
Involvement Of The Nucleotide Excision Repair
Protein UvrA In Instability Of CAG*CTG Repeat Sequences In Escherichia coli.
The Journal of Biological Chemistry. 276(33): 30878-30884 (2001).
- Desjardins, A.E., Bai, G., Plattner, R.D., Proctor, R.H.
Analysis Of Aberrant Virulence Of Gibberella zeae Following Transformation-Mediated Complementation Of A
Trichothecene-Deficient (Tri5) Mutant. Microbiology. 146: 2059-2068 (2000).
- Grodsky, N.B., Soundar, S., Colman, R.F. Chloroplast Targeting, Distribution and Transcriptional
Fluctuation Of AtMinD1, a Eubacteria-Type Factor Critical For Chloroplast Division. Plant Cell Physiology.
41(10): 1119-1128 (2000).
- Li, Y., Pursell, Z.F., Linn, S.
Identification and Cloning Of Two Histone Fold Motif-Containing Subunits Of HeLA DNA Polymerase.
The Journal of Biological Chemistry. 275(30): 23247-23252 (2000).
- Shlyakhtenko, L., Potaman, V., Sinden, R., Gall, A. Y. Lyubchenko, Y.
Structure and Dynamics Of Three-way DNA Junctions:
Atomic Force Microscopy Studies. Nucleic Acids Research. 28(18): 3472-3477 (2000).
- Soundar, S., Danek, B.L., Colman, R.F. Identification By
Mutagenesis Of Arginines In The Substrate Binding Site Of The Porcine NADP-dependent Isocitrate Dehydrogenase.
The Journal of Biological Chemistry. 275(8): 5606-5612 (2000).
- Sugino, H., Terakawa, Y., Yamasaki, A., Nakamura, K., Higuchi, Y., Matsubara, J., Kuniyoshi, H., Ikegami, S.
Molecular Characterization Of A Novel Nuclear Transglutaminase
That Is Expressed During Starfish Embryogenesis. European Journal of Biochemistry.
269(7): 1957-1967 (2000).
- Chauhan, M.S., Nadir, S., Bailey, T.L., Pryor, A.W., Butler, S.P., Notter, D.R., Velander, W.H., Gwazdauskas, F.C.
Bovine Follicular Dynamics, Oocyte Recovery, and Development
Of Oocytes Microinjected With A Green Fluorescent Protein Construct. Journal of Dairy Science.
82(5): 918-926 (1999).
- Johnson, E., Mincer, T., Schwab, H., Burgin, A., Helinski, D.
Plasmid RK2 ParB
Protein: Purification and
Nuclease Properties. Journal of Bacteriology. 181(19): 6010-6018 (1999).
- Dojka, M.A., Hugenholtz, P., Haack, S.K., Pace, N.R.
Microbial Diversity In A Hydrocarbon- and Chlorinated-Solvent-Contaminated Aquifer Undergoing Intrinsic
Bioremediation. Applied and Environmental Microbiology. 64(10): 3869-3877 (1998).
- Hugenholtz, P., Pitulle, C., Hershberger, K.L., Pace, N.R.
Novel Division Level Bacterial Diversity In A
Yellowstone Hot Spring. Journal of Bacteriology. 180(2): 366-376 (1998).
- Peter, B.J., Ullsperger, C., Hiasa, H., Marians, K.J., Cozzarelli, N.R.
The Structure Of Supercoiled Intermediates In DNA Replication.
Cell. 94(6): 819-827 (1998).
- Lees-Miller, J.P., Kondo, C., Wang, L., Duff, H.J.
Electrophysiological Characterization Of An Alternatively
Processed ERG K+ Channel In Mouse and Human Hearts. Circulation Research. 81(5): 719-726 (1997).
- Li, Y., Asahara, H., Patel, V.S., Zhou, S., Linn, S.
Purification, cDNA Cloning, and Gene Mapping Of The Small Subunit Of Human DNA Polymerase epsilon.
The Journal of Biological Chemistry. 272(51): 32337-32344 (1997).
- Bui, C.T., Lambrinakos, A., Babon, J.J., Cotton, R.G.
Chemical Cleavage Reactions Of DNA On Solid Support: Application In Mutation Detection.
BMC Chemical Biology 3(1): 1 (2003).
- Butchko, R.A., Plattner, R.D., Proctor, R.H. FUM13
Encodes a Short Chain Dehydrogenase/Reductase Required For C-3 Carbonyl Reduction During Fumonisin Biosynthesis In
Gibberella moniliformis. Journal of Agricultral and Food Chemistry. 51(10): 3000-3006 (2003).
- Kaplan, C.W., Kitts, C.L. Bacterial Succession In A
Petroleum Land Treatment Unit. Applied and Environmental Microbiology. 70(3): 1777-1786 (2004).
- Kalivoda, K.A., Steenbergen, S.M., Vimr, E.R., Plumbridge, J.
Regulation Of Sialic Acid Catabolism By The DNA Binding Protein NanR Escherichia coli.
Journal of Bacteriology. 185(16): 4806-4815 (2003).
- de Capdeville, G., Wilson, C.L., Beer, S.V., and Aist, J.R. Alternative Disease Control Agent Induce Resistance to Blue Mold in Harvested “Red Delicious” Apple Fruit. Biological Control. 900-908 (2002).
- Queipo-Ortuño, M.I., Tena, F., Colmenero, J.D., Morata, P.
Comparison Of Seven Commercial DNA Extraction Kits For The Recovery Of Brucella DNA From Spiked Human Serum Samples
Using Real-Time PCR. European Journal of Clinical Microbiology & Infectious. 27(2): 109-114 (2008).
- Chang, J.H., Hampartzoumian, T, Everett, B., Lloyd, A., McCluskey, P.J., Wakefield, D.
Changes In Toll-Like Receptor (TLR)-2 and TLR4 Expression and
Function But Not Polymorphisms Are Associated With Acute Anterior Uveitis.
Investigative Ophthalmology & Visual Science. 48(4): 1711-1717 (2007).
- Valiante, S., Prisco, M., Capaldo, A., Zambrano, I., De Falco, M., Andreuccetti, P., Laforgia, V., Varano, L.
Molecular Characterization and Gene Expression Of The Pituitary
Adenylate Cyclase-Activating Polypeptide (PACAP) In The Lizard Brain. Brain Research. 1127: 66-75.(2007).
- Navarro, E., Segura, J.C., Castaño, M.J., Solera, J.
Use Of Real-Time Quantitative Polymerase Chain Reaction To Monitor The Evolution Of Brucella melitensis
DNA Load During Therapy and Post-Therapy Follow-Up In Patients With Brucellosis. Clinical Infectious Diseases.
42(9): 1266-1273 (2006).
- Parr, R.L., Dakubo, G.D., Crandall, K.A., Maki, J., Reguly, B., Aguirre, A., Wittock, R., Robinson, K., Alexander, J.S., Birch-Machin, M.A., Abdel-Malak, M., Frober, M.K., Diamandis, E.P., and Thayer, R.E. Somatic Mitochondrial DNA Mutations in Prostate Cancer and Normal Appearing Adjacent Glands in Comparison to Age-Matched Prostate Samples without Malignant Histology. Journal of Molecular Diagnostics. 8(3): 312-319 (2006).
- Serý, O., Didden, W., Mikes, V., Pitelová, R., Znojil, V., Zvolský, P.
The Association Between High-Activity COMT Allele and
Alcoholism. Neuro Endocrinology Lett. 27(1-2):231-235 (2006).
- Kasparovska, J., Hribkova, H., Hlouskova, R., Novotny, M., Glaskova, K., Simek, V., Mikes, V., Zvolsky, P., Sery, O.
TaqI A Polymorphism Of The DRD2 Gene and Alcoholism In The Czech Republic. Ceska A Slovenska Psychiatrie.
99(1): 5-9 (2003).
- Sery, O., Hladilova, R., Novotny, M., V. Znojil, V., P. Zvolsky, P. Polymorfismus
genu pro IL-6 ma vztah k dispozicim k zavislosti na alkoholu. Ceska a Slovenska Psychiatrie.
99(4): 5-9 (2003).
- Sery, O., Hladilova, R., Novotny, M., Hribkova, H., Znojil, V., Zvolsky, P.,
Association Between -174 G/C Polymorphism Of Interleukin-6 Gene and Alcoholism. Acta Neuropsychiatrica.
15(5): 257-261 (2003).
- Badali, H., Gueidan, C., Najafzadeh, M.J., Bonifaz, A., Gerrits van den Ende, A.H.G., de Hoong, G.S. Biodiversity of the genus Cladophialophora. Studies in Mycology. 61: 175-191 (2008).
- Dandie, C.E., Miller, M.N., Burton, D.L., Zebarth, B.J., Trevors, J.T., Goyer, C.
Nitric Oxide Reductase-Targeted Real-Time PCR Quantification Of Denitrifier Populations In Soil.
Applied Environmental Microbiology. 73(13): 4250-4258 (2007).
- Fernandez-Delgado, M., Contreras, M., Garcia-Amado, M.A., Gueneau, P., Suarez, P.
Occurrences Of Proteus mirabilis Associated With Two
Species Of Venezuelan Oyster. Revista Do Instituto de Medicina Tropical de Sao Paulo.
49(6): 355-359 (2007).
- Lekberg, Y., Koide, R.T., Rohr, J.R., Aldrich-Wolfe, L., Morton, J.B.
Role Of Niche Restrictions and Dispersal
In The Composition Of Arbuscular Mycorrhizal Fungal Communities. Journal of Ecology.
95(1): 95-105 (2007).
- Luna, R.A., Fasciano, L.R., Jones, S.C., Boyanton, B.L., Ton, T.T., Versalovic, J.
DNA Pyrosequencing-Based Bacterial Pathogen
Identification In A Pediatric Hospital Setting. Journal of Clinical Microbiology. 45(9): 2985-2992 (2007).
- Weber, C. F., King, G.M.
Physiological, Ecological, and Phylogenetic Characterization Of Stappia, A Marine CO-Oxidizing Bacterial Genus.
Applied and Environmental Microbiology. 73(4): 1266-1276 (2007).
- Mannisto, M.K, Haggblom, M.M.
Characterization Of Psychrotolerant Heterotrophic Bacteria From Finnish Lapland.
System and Applied Microbiology. 29(3): 229-243 (2006).
- Fajardo-Cavazos, P., Link. L., Melosh, H.J., Nicholson, W.L.
Bacillus subtilis Spores On Artificial Meteorites
Survive Hypervelocity Atmospheric Entry: Implications For Lithopanspermia.
Astrobiology. 5(6): 726-736 (2005).
- Koide, R.T. Nucleic Acid Isolation From Ecological
Samples – Fungal Associations, Mycorrhizae. Methods in Enzymology. 395: 58-72 (2005).
- Cangelosi, G.A., Freeman, R.J., Lewis, K.N., Livingston-Rosanoff, D., Shah, K.S., Milan, S.J., Goldberg, S.V.
Evaluation Of A High-Throughput Repetitive-Sequence-Based
PCR System For DNA Fingerprinting Of Mycobacterium tuberculosis and Mycobacterium avium
Complex Strains. Journal of Clinical Microbiology. 42(6): 2685-2693 (2004).
- Castro, V.A., Thrasher, A.N., Healy, M., Ott, C.M., Pierson, D.L.
Microbial Characterization During The Early
Habitation Of The International Space Station. Microbial Ecology. 47(2): 119-126 (2004).
- Gira, A.K., Reisenauer, A.H., Hammock, L., Nadiminti, U., Macy, J.T., Reeves, A., Burnett, C., Yakrus, M.A.,
Toney, S., Jensen, B.J., Blumberg, H.M., Caughman, S.W., Nolte, F.S.
Furunculosis Due To Mycobacterium mageritense
Associated With Footbaths At A Nail Salon. Journal of Clinical Microbiology. 42(4): 1813-1817 (2004).
- Gonzalez, B.E., Martinez-Aguilar, G., Mason, E.O.Jr., Kaplan, S.L.
Azithromycin Compared With beta-Lactam Antibiotic
Treatment Failures In Pneumococcal Infections Of Children. The Pediatric Infectious Disease Journal.
23(5): 399-405 (2004).
- Gonzalez, B.E., Hulten, K.G., Kaplan, S.L., Mason, E.O.Jr., The U.S. Pediatric Multicenter Pneumococcal
Surveillance Study Group.
Clonality Of Streptococcus pneumoniae Serotype 1 Isolates From Pediatric Patients In The United States.
Journal of Clinical Microbiology. 42(6): 2810-2812 (2004).
- Healy, M., Reece, K., Walton, D., Huong, J., Shah, K., and Konotoyiannis, D.P.
Identification To The Species Level and Differentiation
Between Strains Of Aspergillus Clinical Isolates By Automated Repetitive-Sequence-Based PCR.
Journal of Clinical Microbiology. 24(9): 4016-4024 (2004).
- Ishii, S., Loynachan, T.E.
Rapid and Reliable DNA Extraction Techniques From Trypan-Blue-Stained Mycorrhizal Roots: Comparison Of Two Methods.
Mycorrhiza. 14(4): 271-275 (2004).
- Johnston, L.M., Jaykus, L.A.
Antimicrobial Resistance Of Enterococcus Species Isolated From Produce.
Applied and Environmental Microbiology. 70(5): 3133-3137 (2004).
- Pena, J.A., Li, S.Y., Wilson, P.H., Thibodeau, S.A., Szary, A.J., Versalovic, J.
Genotypic and Phenotypic Studies Of
Murine Intestinal Lactobacilli: Species Differences In Mice With and Without Colitis.
Applied and Environmental Microbiology. 70(1): 558-568 (2004).
- Smith, D.S., Maxwell, P.W.,De Boer, S.H.
Method For The Detection Of Synthetic cry3A
In Transgenic Potatoes.Journal of Agricultural and Food Chemistry. 52(4): 809-815 (2004).
- Zhang, L., Srinivasan, U., Marrs, C.F., Ghosh, D., Gilsdorf, J.R., Foxman, B.
Library On A Slide For Bacterial Comparative Genomics. BMC Microbiology. 4(12) (2004).
- Zhang, W., Jayarao, B.M.,Knabel, S.J. Multi-Virulence-Locus
Sequence Typing Of Listeria monocytogenes. Applied and Environmental Microbiology.
70(2): 913-920 (2004).
- Zhao, T., Doyle, M.P., Zhao, P.
Control Of Listeria monocytogenes In A Biofilm By Competitive-Exclusion Microorganisms.
Applied and Environmental Microbiology. 70(7): 3996-4003 (2004).
- Cramer, R., Lawrence, C. Cloning Of A Gene Encoding
An Alt a 1 Isoallergen Differentially Expressed By The Necrotrophic Fungus Alternaria brassicicola
During Arabidopsis Infection. Applied and Environmental Microbiology. 69(4): 2361-2364 (2003).
- Halda-Alija, L., Subgani, R.K., and Guettler, T.
Identification Of Indole-3-Acetic Acid Producing Freshwater
Wetland Rhizosphere Bacteria Associated With Juncus effuses L.. Canadian Journal of Microbiology.
12(49): 781-787 (2003).
- Hong, Y., Berrang, M., Liu, T., Hofacre, C., Sanchez, S., Wang, L., Maurer, J.
Rapid Detection Of Campylobacter coli, C. jejuni,
and Salmonella enterica On Poultry Carcasses By Using PCR-Enzyme-Linked Immunosorbent Assay.
Applied and Environmental Microbiology. 69(6): 3492-3499 (2003).
- King, G.M.
Molecular and Culture-Based Analyses Of Aerobic Carbon Monoxide Oxidizer Diversity.
Applied and Environmental Microbiology. 69(12): 7257-7265 (2003).
- King, G.M.
Uptake Of Carbon Monoxide and Hydrogen At Environmentally Relevant Concentrations By Mycobacteria.
Applied and Environmental Microbiology. 69(12): 7266-7272 (2003).
- Mowbray, E., Buck, G., Humbaugh, K., Marshall, G.
Maternal Colonization and Neonatal Sepsis Caused By
Edwardsiella tarda. Pediatrics. 111(3): 296-298 (2003).
- Koide, R.T., Dickie, I.A.
Kit-Based: Low-Toxicity Method For Extracting and Purifying Fungal
DNA From Ectomycorrhizal Roots. Biotechniques. 32(1): 52-56 (2002).
- Tamayo, R., Ryan, S., McCoy, A., Gunn, J.
Identification and Genetic Characterization Of PmrA-Regulated Genes and Genes Involved In Polymyxin B Resistance
In Salmonella enterica Serovar Typhimurium.
Infection and Immunity. 70(12): 6770-6778 (2002).
- Labeda, D.P., and Kroppenstedt, R.M. Proposal for the new genus Allokutzneria gen. nov. within the suborder Pseudonocardineae and transfer of Kibdelosporangium albatum Tomita et al. 1993 as Allokutzneria albata comb. nov.. International Journal of Systematic and Evolutionary Microbiology. 58: 1472-1475 (2008).
- Labeda, D.P., Donahue, J.M., Sells, S.F., and Kroppenstedt, R.M. Lentzea kentuckyensis sp. nov., of equine origin. International Journal of Systematic and Evolutionary Microbiolgy. 57: 1780-1783 (2007).
- Bauer, B., Hartz, A.M., Fricker, G., Miller, D.S.
Pregnane X Receptor Up-Regulation Of P-Glycoprotein Expression and Transport Function At The Blood-Brain Barrier.
Molecular Pharmacology. 66(3): 413-419 (2004).
- Lopez-Matas, M.A., Nuñez, P., Soto, A., Allona, I., Casado, R., Collada, C., Guevara, M.A., Aragoncillo, C.,
Gomez, L. Protein Cryoprotective Activity Of a Cytosolic
Small Heat Shock Protein That Accumulates Constitutively In Chestnut Stems and Is Up-Regulated By Low and
High Temperatures. Plant Physiology. 134(4): 1708-1717 (2004).
- Scott, H.N., Laible, P.D., Hanson, D.K.
Sequences Of Versatile Broad-Host-Range Vectors Of The RK2
Family. Plasmid. 50(1): 74-79 (2003).
- Lukomski, S., Nakashima, K., Abdi, I., Cipriano, V.J., Shelvin, B.J., Graviss, E.A., Musser, J.M.
Identification and Characterization Of A Second Extracellular
Collagen-Like Protein Made By Group A Streptococcus: Control Of Production At The Level Of Translation.
Infection and Immunity. 69(3): 1729-1738 (2001).
- Allan, G.J., Shand, J.H., Beattie, J., Flint, D.J.
Identification Of Novel Sites In The Bovine Growth Hormone Receptor Involved In Binding Hormone and Conferring
Species Specificity. European Journal of Biochemistry. 261(2): 555-561 (1999).
- Wells, C.A., Salvage-Jones, J.A., Li, X., Hitchens, K., Butcher, S., Murray, R.Z., Beckhouse, A.G., Lo, Y., Manzanero, S., Cobbold, C., Schroder, K., Ma, B., Orr, S., Stewart, L., Lebus, D., Sobieszczuk, P., Hume, D.A., Stow, J., Blanchara, H., and Ashman, R.B. The Macrophage-Inducible C-Type Lectin, Micle is and Essential Component of the Innate Immune Response to Candida albicans. The Journal of Immunology. 180: 7404-7413 (2008).
- Morin, P.A., Hedrick, N.M., Robertson, K.M., Leduc, C.A. Comparative Mitochondrial and Nuclear Quantitative PCR of Historical Marine Tissue, Bone, Baleen, and Tooth Samples
. Molecular Ecology Notes. (7) 3: 404-411 (2007).
- Ulrich, P.N., Colton, C.M., Hoover, C.A., Gaffney, P.M., Marsh, A.G. Haplosporidium Nelsoni rDNA Detection in Oysters from the Gulf of Mexico and the Caribbean Sea. Journal of Shellfisheries Research. (2007).
- Billaud, J.N., Peterson, D., Barr, M., Chen, A., Sallberg, M., Garduno, F., Goldstein, P., McDowell, W., Hughes, J., Jones, J., and Milich, D. Combinatorial Approach to Hepadnavirus-Like Particle Vaccine Design . Journal of Virology. 13656-13666 (2005).
- Krinks, J. Microbial Assesment the Lindesn Bioremediation System Treating Acid Mine Drainage in the Huff Run Watershed .
- Casper, R.M., Jarman, S.N., Deagle, B.E., Gales, N.J., Hindell, M.A. Detecting Prey From DNA In Predator Scats:
A Comparison With Morphological Analysis, Using Arctocephalus Seals Fed a Known Diet.
Journal of Experimental Marine BIology and Ecology. 347(1-2): 144 (2007).
- Casper, R.M., Jarman, S.N., Gales, N.J., Hindell, M.A.
Combining DNA and Morphological Analyses Of Faecal
Samples Improves Insight Into Trophic Interactions: A Case Study Using A Generalist Predator.
Marine Biology. 152(4): 815-825 (2007).
- Estonba, A., Solís, A., Iriondo, M., Sanz-Martín, M.J., Pérez-Suárez, G., Markov, G., Palacios, F.
The Genetic Distinctiveness Of The Three Iberian Hare Species: Lepus europaeus, L. granatensis,
and L. castroviejoi. Mammalian Biology. 71(1): 52-59 (2006).
- Sery, O., Drtilkova, I., Theiner, P., Pitelova, R., Staif, R., Znojil, V.,
Lochman, J., Didden, W. Polymorphism Of DRD2 gene and ADHD.
Neuro Endocrinology Lett. 27(1-2): 236-240 (2006).
- Wong, E.M., Russock, H.I.
Methods For Isolating Genomic DNA From The Mossambique Tilapia (Oreochromis mossambicus)
For Randomly Amplified Polymorphic DNA Analysis. Journal of Ichthyology. 45(1): 183-184 (2005).
- Zeman, K., Pospisil, L., Èanderle, J., Strobolva, H., Leypold, J., Gregor, Z.,Medkova, Z., Servy, O.
Direct and Indirect Evidence Of Chlamydia Pneumoniae
In Patients With Significant Stenosis Of A. Carotis Of Atherosclerotic Origin. SCRIPTA MEDICA (BRNO).
77(3): 173–180 (2004).
- Chauhan, A., and Williams, H.N. Biostimulation of Estuarine Microbiota on Substrate Coated
Agar Slides: A Novel Approach to Study Diversity
of Autochthonous Bdellovibrio- and Like Organisms. Microbial Ecology. 55: 640-650 (2008).
- Wang, X., Hoefel, D., Saint, C.P., Monis, P.T., Jin, B.
The Isolation And Microbial Community Analysis Of Hydrogen Producing Bacteria From Activated Sludge.
Journal of Applied Microbiology. 103(5): 1415-1423 (2007).
- Corral, J., Aznar, J., Gonzalez-Conejero, R., Villa, P., Miñano, A., Vayá, A., Carrell, R.W., Huntington, J.A.,
Vicente, V. Homozygous Deficiency Of Heparin Cofactor II.
Circulation. 110(10): 1303-1307 (2004).
- Inagaki, F., Suzuki, M., Takai, K., Oida, H., Sakamoto, T., Aoki, K., Nealson, K.H., Horikoshi, K..
Microbial Communities Associated With Geological Horizons In
Coastal Subseafloor Sediments From The Sea of Okhotsk. Applied and Environmental Microbiology.
69(12): 7224-7235 (2003).
- Miron, M., Lasko, P., Sonenberg, N.
Signaling From Akt To FRAP/TOR Targets Both 4E-BP and S6K In Drosophila melanogaster.
Molecular and Cellular Biology. 23(24): 9117-9126 (2003).
- Payne, K.J., Huang, G., Sahakian, E., Zhu, J.Y., Barteneva, N.S., Barsky, L.W., Payne, M.A., Crooks, G.M.
Ikaros Isoform X Is Selectively Expressed In Myeloid
Differentiation. Journal of Immunology. 170(6): 3091-3098 (2003).
- Seguritan, V., Feng, I.W., Rohwer, F., Swift, M., Segall, A.M.
Genome Sequences Of Two Closely Related Vibrio
parahaemolyticus Phages, VP16T and VP16C. Journal of Bacteriology. 185(21): 6434-6447 (2003).
- González-Conejero, R., Corral, J., Roldán, V., Martínez, C., Marín, F., Rivera, J., Iniesta, J.A.,
Lozano, M.L., Marco, P., Vicente, V.
A Common Polymorphism In The Annexin V Kozak Sequence (-1C>T) Increases Translation Efficiency and Plasma Levels
Of Annexin V, and Decreases The Risk Of Myocardial Infarction In Young Patients. Blood.
100(6): 2081-2086 (2002).
- Song, X.M., Perez-Casal, J., Fontaine, M.C., Potter, A.A.
Bovine Immunoglobulin A (IgA)-Binding Activities Of The Surface-Expressed Mig Protein Of
Streptococcus dysgalactiae. Microbiology. 148(pt 7): 2055-2064 (2002).
- Toro, J.R., Shevchenko, Y.O., Compton, J.G., Bale, S.J.
Exclusion Of PTEN,
CTNNB1, and PTCH As Candidate Genes For Birt-Hogg-Dube Syndrome. Journal of Medical Genetics.
39(2):e10 (2002).
- Pavelock, K., Braas, K., Ouafik, L., Osol, G., May, V.
Differential Expression and Regulation Of The Vascular Endothelial Growth Factor Receptors Neuropilin-1 and
Neuropilin-2 In Rat Uterus. Endocrinology. 142(2): 613-622 (2001).
- Takai, K., Komatsu, T., Inagaki, F., Horikoshi, K.
Distribution Of Archaea In A Black Smoker Chimney Structure. Applied and Environmental Microbiology.
67(8): 3618-3629 (2001).
- Lekberg, Y., Koide, R.T., Rohr, J.R., Aldrich-Wolfe, L., Morton, J.B.
Role Of Niche Restrictions and Dispersal
In The Composition Of Arbuscular Mycorrhizal Fungal Communities. Journal of Ecology.
95(1): 95-105 (2007).
- Weber, C.F., King, G.M.
Physiological, Ecological, and Phylogenetic Characterization Of Stappia, A Marine CO-Oxidizing Bacterial Genus.
Applied and Environmental Microbiology. 73(4): 1266-1276 (2007).
- Arcate, J.M., Karp, MA., Nelson, E.B. Diversity of Peronosporomycete (Oomycete) Communities Associated with the Rhizosphere of Different Plant Species . Microbial Ecology. 51: 36-50 (2006).
- Charles, A.K., Hisheh, S., Liu, D., Rao, R.M., Waddell, B.J., Dickinson, J.E., Rao, A.J., Dharmarajan, A.M.
The Expression Of Apoptosis Related Genes In The First
Trimester Human Placenta Using A Short Term In Vitro Model. Apoptosis. 10(1): 135-140 (2005).
- Casas, V., Kline, D.I., Wegley, L., Yu, Y., Breitbart, M., Rohwer, F.
Widespread Association Of A Rickettsiales-Like Bacterium With
Reef-Building Corals. Environmental Microbiology. 6(11): 1137-1148 (2004).
- Burns, D.G., Camakaris, H.M., Janssen, P.H., Dyall-Smith, M.L.
Combined Use Of Cultivation-Dependent and Cultivation-Independent
Methods Indicates That Members Of Most Haloarchaeal Groups In An Australian Crystallizer Pond Are Cultivable.
Applied and Environmental Microbiology. 70(9): 5258-5265 (2004).
- Conn, V.M., Franco, C.M. Analysis Of The Endophytic
Actinobacterial Population In The Roots Of Wheat (Triticum aestivum L.) By Terminal
Restriction Fragment Length Polymorphism and Sequencing Of 16S rRNA Clones.
Applied and Environmental Microbiology. 70(3): 1787-1794 (2004).
- Dwyer, T., Stankovich, J.M., Blizzard, L., FitzGerald, L.M., Dickinson, J.L., Reilly, A., Williamson, J.,
Ashbolt, R., Berwick, M., Sale, M.M.
Does The Addition Of Information On Genotype Improve Prediction Of The Risk Of Melanoma and Nonmelanoma Skin
Cancer Beyond That Obtained From Skin Phenotype? American Journal of Epidemiology. 159(9): 826-833
(2004).
- García-Velasco, J.A., Zúñiga, A., Pacheco, A., Gómez, R., Simón, C., Remohí, J., Pellicer, A.
Coasting Acts Through Downregulation Of
VEGF Gene Expression and Protein Secretion. Human Reproduction. 19(7): 1530-1538 (2004).
- Gómez, R., Lima, I., Simón, C., Pellicer, A. Administration
Of Low-Dose LH Induces Ovulation and Prevents Vascular Hyperpermeability and Vascular Endothelial
Growth Factor Expression In Superovulated Rats. Reproduction. 127(4): 483-489 (2004).
- Hu, D.G., Webb, G., Hussey, N. Aneuploidy Detection In Single
Cells Using DNA Array-Based Comparative Genomic Hybridization. Molecular Human Reproduction.
10(4): 283-289 (2004).
- Kaplan, C.W., Kitts, C.L. Bacterial Succession In A
Petroleum Land Treatment Unit. Applied and Environmental Microbiology. 70(3): 1777-1786 (2004).
- Kassenga, G., Pardue, J.H., Moe, W.M., Bowman, K.S.
Hydrogen Thresholds As Indicators Of Dehalorespiration In Constructed Treatment Wetlands.
Environmental Science Technology. 38(4): 1024-1030 (2004).
- Krüger, R., Rakowski, S.A., Filutowicz, M.
Isomerization and Apparent DNA Bending By pi, The Replication Protein Of Plasmid R6K.
Biochemical and Biophysical Research Communications. 313(4): 834-840 (2004).
- Lihová, J., Aguilar, J.F., Marhold, K., Feliner, G.N.
Origin Of The Disjunct Tetraploid Cardamine amporitana (Brassicaceae) Assessed With Nuclear and
Chloroplast DNA Sequence Data. American Journal of Botany. 91: 1231-1242 (2004).
- Park, K., Luo, J.M., Hisheh, S., Harvey, A.R., Cui, Q.
Cellular Mechanisms Associated With Spontaneous and Ciliary Neurotrophic Factor-cAMP-Induced Survival and Axonal
Regeneration Of Adult Retinal Ganglion Cells. The Journal of Neuroscience. 24(48): 10806-10815 (2004).
- Sakamoto, M., Huang, Y., Ohnishi, M., Umeda, M., Ishikawa, I., Benno, Y.
Changes In Oral Microbial Profiles After
Periodontal Treatment As Determined By Molecular Analysis Of 16S rRNA Genes. Journal of Medical Microbiology.
53(Pt 6): 563-571 (2004).
- Vora, G.J., Meador, C.E., Stenger, D.A., Andreadis, J.D.
Nucleic Acid Amplification Strategies For DNA Microarray-Based Pathogen Detection.
Applied and Environmental Microbiology. 70(5): 3047-3054 (2004).
- Warner, J., Epstein, M., Sweet, A., Singh, D., Burgess, J., Stranks, S., Hill, P.,
Perry-Keene, D., Learoyd, D., Robinson, B., Birdsey, P., Mackenzie, E., Teh, B.T., Prins, J.B., Cardinal, J.
Genetic Testing In Familial Isolated
Hyperparathyroidism: Unexpected Results and Their Implications. Journal of Medical Genetics.
41(3): 155-160 (2004).
- Weizmann, Y., Patolsky, F., Popov, I., Willner, I.
Telomerase-Generated
Templates For The Growing Of Metal Nanowires. Nano Letters. 4(5): 787-792 (2004).
- Zhu, Q.H., Ramm, K., Shivakkumar, R., Dennis, E.S., Upadhyaya, N.M.
The ANTHER INDEHISCENCE1 Gene Encoding A
Single MYB Domain Protein Is Involved In Anther Development In Rice. Plant Physiology.
135(3): 1514-25 (2004).
- Branford, S., Rudzki, Z., Walsh, S., Parkinson, I., Grigg, A., Szer, J., Taylor, K.,
Herrmann, R., Seymour, J.F., Arthur, C., Joske, D., Lynch, K., Hughes, T.
Detection of BCR-ABL Mutations In Patients With CML
Treated With Imatinib Is Virtually Always Accompanied By Clinical Resistance, and Mutations In The ATP
Phosphate-Binding Loop (P-loop) Are Associated With A Poor Prognosis. Blood. 102(1): 276-283 (2003).
- Buchan, A., Newell, S.Y., Butler, M., Biers, E.J., Hollibaugh, J.T., Moran, M.A.
Dynamics Of Bacterial and Fungal Communities On Decaying Salt
Marsh Grass. Applied and Environmental Microbiology. 69(11): 6676-6687 (2003).
- Byun, R., Nadkarni, M.A., Chhour, K.L., Martin, F.E., Jacques, N.A., Hunter, N.
Quantitative Analysis Of Diverse Lactobacillus
Species Present In Advanced Dental Caries. Journal of Clinical Microbiology. 42(7): 3128-3136 (2003).
- González, A.J., Rodicio, M.R., Mendoza, M.C.
Identification Of An Emergent and Atypical Pseudomonas viridiflava Lineage Causing Bacteriosis In
Plants Of Agronomic Importance In A Spanish Region. Applied and Environmental Microbiology.
69(5): 2936-2941 (2003).
- Gonzalez-Franco, A.C., Deobald, L.A., Spivak, A., Crawford, D.L.
Actinobacterial Chitinase-Like Enzymes:
Profiles Of Rhizosphere Versus Non-Rhizosphere Isolates. Canadian Journal of Microbiology. 49(11):
683-698 (2003).
- King, G.M. Molecular and Culture-Based Analyses Of
Aerobic Carbon Monoxide Oxidizer Diversity. Applied and Environmental Microbiology. 69(12): 7257-7265 (2003).
- King, G.M. Uptake Of Carbon Monoxide and Hydrogen At
Environmentally Relevant Concentrations By Mycobacteria. Applied and Environmental Microbiology.
69(12): 7266-7272 (2003).
- La, T., Phillips, N.D., Hampson, D.J. Development Of A
Duplex PCR Assay For Detection Of Brachyspira hyodysenteriae and Brachyspira pilosicoli
In Pig Feces. Journal of Clinical Microbiology. 41(7): 3372-3375 (2003).
- Mikucki, J.A., Liu, Y., Delwiche, M., Colwell, F.S., Boone, D.R.
Isolation Of A Methanogen From Deep Marine Sediments That Contain Methane Hydrates, and Description Of
Methanoculleus submarinus sp. Applied and Environmental Microbiology. 69(6): 3311-3316 (2003).
- Mummey, D.L., Stahl, P.D.
Spatial and Temporal Variability Of Bacterial 16S rDNA-Based T-RFLP Patterns Derived From Soil Of Two Wyoming
Grassland Ecosystems. FEMS Microbiology Ecology. 46(1): 113-120 (2003).
- Nilsson, W.B., Paranjype, R.N., DePaola, A., Strom, M.S.
Sequence Polymorphism Of The 16S rRNA Gene Of
Vibrio vulnificus Is A Possible Indicator Of Strain Virulence. Journal of Clinical Microbiology.
41(1): 442-446 (2003).
- Pryce, T.M., Palladino, S., Kay, I.D., Coombs, G.W. Rapid
Identification Of Fungi By Sequencing The ITS1 and ITS2 Regions Using An Automated Capillary Electrophoresis System.
Medical Mycology. 41(5): 369-381 (2003).
- Sait, L., Galic, M., Strugnell, R.A., Janssen, P.H.
Secretory Antibodies Do Not Affect The Composition Of The Bacterial Microbiota In The Terminal Ileum Of 10-Week
Old Mice. Applied and Environmental Microbiology. 69(4): 2100-2109 (2003).
- Seguritan, V., Feng, I.W., Rohwer, F., Swift, M., Segall, A.M.
Genome Sequences Of Two Closely Related Vibrio
parahaemolyticus Phages, VP16T and VP16C. Journal of Bacteriology. 185(21): 6434-6447 (2003).
- Vellani, T.S., Myers, R.S. Bacteriophage SPP1 Chu Is An
Alkaline Exonuclease In The SynExo Family Of Viral Two-Component Recombinases.
Journal of Bacteriology. 185(8): 2465-2474 (2003).
- Buchan, A., Newell, S.Y., Moreta, J.I., Moran, M.A. Analysis
Of Internal Transcribed Spacer (ITS) Regions Of rRNA Genes In Fungal Communities In A Southeastern U.S. Salt Marsh.
Microbial Ecology. 43(3): 329-340 (2002).
- Ingram, W.J., Wicking, C.A., Grimmond, S.M., Forrest, A.R., Wainwright, B.J.
Novel Genes Regulated By Sonic Hedgehog In Pluripotent
Mesenchymal Cells. Oncogene. 21(53): 8196-8205 (2002).
- Lower, K.M., Turner, G., Kerr, B.A., Mathews, K.D., Shaw, M.A., Gedeon, A.K., Schelley, S.,
Hoyme, H.E., White, S.M., Delatycki, M.B., Lampe, A.K., Clayton-Smith, J., Stewart, H.,
van Ravenswaay, C.M., de Vries, B.B., Cox, B., Grompe, M., Ross, S., Thomas, P., Mulley, J.C., Gécz, J.
Mutations In PHF6 Are Associated With
Borjeson-Forssman-Lehmann Syndrome. Nature Genetics. 32(12): 661-665 (2002).
- Nilsson, W.B., Strom, M.S. Detection and Identification Of
Bacterial Pathogens Of Fish In Kidney Tissue Using Terminal Restriction Fragment Length Polymorphism (T-RFLP)
Analysis Of 16S rRNA Genes. Diseases of Aquatic Organisms. 48(3): 175-185 (2002).
- Saitoh, S., Noda, S., Aiba, Y., Takagi, A., Sakamoto, M., Benno, Y., Koga, Y.
Bacteroides ovatus As The Predominant Commensal
Intestinal Microbe Causing A Systemic Antibody Response In Inflammatory Bowel Disease.
Clinical and Diagnostic Laboratory Immunology. 9(1): 54-59 (2002).
- Sakamoto, M., Suzuki, M., Umeda, M., Ishikawa, I., Benno, Y.
Reclassification Of Bacteroides forsythus (Tanner et al. 1986) As Tannerella forsythensis
corrig., gen. nov., comb. nov. International Journal of Systematic and Evolutionary Microbiology.
52(Pt 3): 841-849 (2002).
- Seeber, R.M., Smith, J.T., Waddell, B.J.
Plasma Leptin-Binding Activity and Hypothalamic Leptin Receptor Expression During Pregnancy and
Lactation In The Rat. Biology of Reproduction. 66(6): 1762-1767 (2002).
- Srimanote, P., Paton, A.W., Paton, J.C. Characterization Of A
Novel Type IV Pilus Locus Encoded On The Large Plasmid Of Locus Of Enterocyte Effacement-Negative Shiga-Toxigenic
Escherichia coli Strains That Are Virulent For Humans. Infection and Immunity. 70(6): 3094-3100
(2002).
- Strømme, P., Mangelsdorf, M.E., Shaw, M.A., Lower, K.M., Lewis, S.M., Bruyere, H.,
Lütcherath, V., Gedeon, A.K., Wallace, R.H., Scheffer, I.E., Turner, G., Partington, M.,
Frints, S.G., Fryns, J.P., Sutherland, G.R., Mulley, J.C., Gécz, J.
Mutations In The Human Ortholog Of Aristaless
Cause X-Linked Mental Retardation and Epilepsy. Nature Genetics. 30(4): 441-445 (2002).
- Tiquia, S.M., Lloyd, J., Herms, D.A., Hoitink, H.A.J., Michel Jr, F.C.
Effects Of Mulching and Fertilization On Soil Nutrients, Microbial Activity and Rhizosphere Bacterial Community
Structure Determined By Analysis Of TRFLPs Of PCR-Amplified 16S rRNA Genes. Applied Soil Ecology.
21(1): 31-48 (2002).
- Arzumanov, A., Walsh, A.P., Rajwanshi, V.K., Kumar, R., Wengel, J., Gait, M.J.
Inhibition Of HIV-1 Tat-Dependent Trans Activation
By Steric Block Chimeric 2’-O-Methyl/LNA Oligoribonucleotides. Biochemistry. 40(48): 14645-14654
(2001).
- Buchan, A., Neidle, E.L., Moran, M.A.
Diversity Of The Ring-Cleaving Dioxygenase Gene pcaH In A Salt Marsh Bacterial Community.
Applied and Environmental Microbiology. 67(12): 5801-5809 (2001).
- Kaplan, C.W., Astaire, J.C., Sanders, M.E., Reddy, B.S., Kitts, C.L.
16S Ribosomal DNA Terminal Restriction Fragment Pattern
Analysis Of Bacterial Communities In Feces Of Rats Fed Lactobacillus acidophilus NCFM.
Applied and Environmental Microbiology. 67(4): 1935-1939 (2001).
- Mizutanim, J., Chiba, T., Tanaka, M., Higuchi, K., Mori, M.
Unique Mutations In Mitochondrial DNA Of Senescence-Accelerated Mouse (SAM) Strains.
Journal of Heredity. 92(4): 352-355 (2001).
- Pavelock, K., Braas, K., Ouafik, L., Osol, G., May, V.
Differential Expression and Regulation Of The Vascular
Endothelial Growth Factor Receptors Neuropilin-1 and Neuropilin-2 In Rat Uterus. Endocrinology. 142(2): 613-622
(2001).
- Yeadon, P.J., Rasmussen, J.P., Catcheside, D.E.
Recombination Events In Neurospora crassa May Cross A Translocation Breakpoint By A
Template-Switching Mechanism. Genetics. 159(10): 571-579 (2001).
- Bhakta, S., Bartes, A., Bowman, K.G., Kao, W.M., Polsky, I., Lee, J.K., Cook, B.N., Bruehl, R.E.,
Rosen, S.D., Bertozzi, C.R., Hemmerich, S.
Sulfation Of N-Acetylglucosamine By Chondroitin 6-Sulfotransferase 2 (GST-5). The Journal of Biological
Chemistry. 275(51): 40226-40234 (2000).
- Chiu, N.H., Tang, K., Yip, P., Braun, A., Koster, H., Cantor, C.R.
Mass Spectrometry Of Single-Stranded Restriction
Fragments Captured By An Undigested Complementary Sequence. Nucleic Acids Research. 28(8):e31-00 (2000).
- George, J., Raju, R. Alphavirus RNA Genome Repair and
Evolution: Molecular Characterization Of Infectious Sindbis Virus Isolates Lacking a Known Conserved Motif At
The 3 End Of The Genome. Journal of Virology. 74(20): 9776-9785 (2000).
- Wolfe, B.E., Mummey, D.L., Rillig, M.C., Klironomos, J.N.
Small-Scale Spatial Heterogeneity Of Arbuscular Mycorrhizal Fungal Abundance And Community Composition In A Wetland
Plant Community. Mycorrhiza. 17(3): 175-183 (2007).
- Hayashi, H., Takahashi, R., Nishi, T., Sakamoto, M., and Benno, Y. Molecular Analysis of Jejunal, Ileal, Caecal and Retro-sigmoidal Human Colonic Microbiota Using 16S rRNA Gene Libraries and Terminal Restriction Fragment Length Polymorphism. Journal of Medical Microbiology. 54: 1093-1101 (2005).
- Wegley, L., Yu, Y., Breitbart, M., Casa, V., Kline, C.I., Rohwer, F. Coral-associated Archaea. Marine Ecology Progrss Series. 273: 89-96 (2004).
- Vassilopoulos, A>, Gaitanaki, C., Papazafiri, P., Beis, I. Atrial Natriuretic Peptide mRNA Regulation by p38-MAPK in the Perfused Amphibian Heart .
Cellular Physiology and Biochemisty. 16: 183-192 (2005).
- Walker, T.L., Becker, D.K., Collet, C. Characterisation of the Dunaliella tertiolecta RbcS Genes and Their Promoter Activity in Chlamydomonas reinhardtii.
. Plant Cell Reports. 23: 727-735 (2005).
- Stevens, T.A., Iacovoni, J.S., Edelman, D.B., Meech, R.
Identification Of Novel Binding Elements and Gene Targets For The Homeodomain Protein BARX2.
Journal of Biological Chemistry. 279(15): 14520-14530 (2004).
- Madrid, V., Chistoserdov, A., Chapman, M., Price, B. Detection of Corros Ion-Inducing Prokaryotes Using the Dissmilatory Sulfate Reductase Gene . World Intellectual Property Organization. (2008).
- García-Díaz, A., López-Andújar, P., Rodríguez Díaz, J., Montava, R., Torres Barceló, C., Ribes, J.M., Buesa, J. Nasal Immunization Of Mice With A Rotavirus DNA Vaccine That Induces Protective Intestinal IgA Antibodies.
. Vaccine. 23(4): 489-98 (2007).
- Sunagawa, S., DeSantis, T.Z., Piceno, Y.M., Brodie, E.L., DeSalvo, M.K., Voolstra, C.R., Weil E., Andersen, G.L., and Medina, M. Bacterial Diversity and While Plague Disease-associated Community Changes in the Caribbean Coral Montastraea faveolata. The ISME Journal> 1 - 10 (2009).
- Julien, M-C., Dion, P., Lafreniere, C., Antoun, H., Drouin, P. Sources of Clostridia in Raw Milk on Farms. Applied and Environmental Microbiology. 74(20) 6348-6357 (2008).
- Harvey, P.R., Warren, R.A., Wakelin, S. The
Pythium-Fusarium Root Disease Complex - An Emerging Constraint To Irrigated Maize In Southern New South Wales.
CSIRO Publishing. 48: 367-374 (2008).
- Wakelin, S.A., Colloff, M.J., Kookana, R.S.
Effect Of Wastewater Treatment Plant Effluent On Microbial Function and Community Structure In The Sediment Of A
Freshwater Stream With Variable Seasonal Flow. Applied and Environmental Microbiology. 74(9):
2659-2668 (2008).
- Wakelin, S.A., Warren, R.A., Kong, L., Harvey, P.R.
Management Factors Affecting Size and Structure Of Soil Fusarium Communities Under Irrigated Maize
In Australia. Elsevier. 39(2): 201-209 (2008).
- Blackwood, C.B., Buyer, J.S. Evaluating The Physical Capture Method Of Terminal Restriction Fragment
Length Polymorphism For Comparison Of Soil Microbial Communities. Soil Biology & Biochemistry.
39(2): 590-599 (2007).
- Buckley, D.H., Huangyutitham, V., Hus, F., Nelson, T.A.
Stable Isotope Probing With 15N Achieved By Disentangling The Effect Of Genome G+C and Isotope Enriched On
DNA Density. Applied and Environmental Microbiology. 73(10): 3189-3195 (2007).
- Kaestli, M., Mayo, M., Harrington, G., Watt, F., Hill, J., Gal, D., Currie, B.J.
Sensitive and Specific Molecular Detection Of Burkholderia
pseudomallei, The Causative Agent Of Melioidosis, In The Soil Of Tropical Nothern Australia.
Applied and Environmental Microbiology. 73(21): 6891-6897 (2007).
- Kennedy, P.G., Bergemann, S.E., Hortal, S., Bruns, T.D.
Determining The Outcome Of Field-Based Competition
Between Two Rhizopogon Species Using Real-Time PCR. Molecular Ecology. 16(4): 881-890 (2007).
- Kennedy, P.G., Hortal, S., Bergemann, S.E., Bruns, T.D.
Competitive Interactions Among Three
Ectomycorrhizal Fungi and Their Relation To Host Plant Performance. Journal of Ecology. 95(6):
1338-1345 (2007).
- Manzano, M., Moran, A.C., Tesser, B., Gonzales, B.
Role Of Eukaryotic Microbiota In Soil Survival and Catabolic Performance Of The 2,4-D Herbicide Degrading Bacteria
Cupriavidus necator JMP134. Antonie Van Leeuwenhoek. 91(2): 115-126 (2007).
- Nadarajah, N., Allen, D.G., Fulthorpe, R.R.
Effects Of Transient Temperature Conditions On The Divergence
Of Activated Sludge Bacterial Community Structure and Function. Elsevier. 41(12): 2563-2571 (2007).
- Perreault, N.N., Andersen, D.T., Pollard, W.H., Greer, C.W., Whyte, L.G.
Characterization Of The Prokaryotic Diversity In Cold Saline
Perennial Springs Of The Canadian High Arctic. Applied and Environmental Microbiology.
73(5): 1532-1543 (2007).
- Wang, X., Hoefel, D., Saint, C.P., Monis, P.T., Jin, B.
The Isolation And Microbial Community Analysis Of Hydrogen Producing Bacteria From Activated Sludge.
Journal of Applied Microbiology. 103(5): 1415-1423 (2007).
- Whitehouse, C.A., Hottel, H.E.
Comparison Of Five Commercial DNA Extraction Kits For The Recovery Of Francisella tularensis DNA From Spike
Soil Samples. Molecular and Cellular Probes. 21(2): 92-96 (2007).
- Arcate, J.M., Karp, MA., Nelson, E.B. Diversity of Peronosporomycete (Oomycete) Communities Associated with the Rhizosphere of Different Plant Species . Microbial Ecology. 51: 36-50 (2006).
- Blackwood, C.B., Dell, C.J., Smucker, A.J.M., Paul, E.A.
Eubacterial Communities In Different Soil Macroaggregate Environments and Cropping Systems.
Soil Biology & Biochemistry. 38(4): 720-728 (2006).
- Cao, Y., Cherr, G.N., Cordova-Kreylos, A.L., Fan, T.W.M., Green, P.G., Higashi, R.M., LaMontagne, M.G.,
Scow, K.M., Vines, C.A., Yuan, J., Holden, P.A.
Relationships Between Sediment Microbial Communities and Pollutants In Two California Salt Marshes.
Microbial Ecology. 52(4): 619-633 (2006).
- Casas, V., Miyake, J., Balsley, H., Roark, J., Telles, S., Leeds, S., Zurita, I., Breitbart, M., Bartlett, D.,
Azam, F., Rohwer, F. Widespread Occurrence Of
Phage-Encoded Exotoxin Genes In Terrestrial and Aquatic Environments In Southern California.
Federation of European Microbiological Societies Microbial Letter. 261(1): 141-149 (2006).
- Chauhan, A., Reddy, K.R., Ogram, A.V.
Syntrophic-Archaeal Associations In A Nutrient-Impacted Freshwater Marsh. Journal of Applied Microbiology.
100(1): 73–84 (2006).
- Cordova-Kreylos, A.L., Cao, Y., Green, P.G., Hwang, H., Kuivila, K.M., LaMontagne, M.G., Van De Werfhorst,
L.C., Holden, P.A., Scow, K.M. Diversity,
Composition, and Geographical Distribution Of Microbial Communities In California Salt Marsh Sediments.
Applied and Environmental Microbiology. 72(5): 3357-3366 (2006).
- De La Iglesia, R., Castro, D., Ginoccchio, R., Van Der Lelie, D., Gonzales, B.
Factors Influencing The Composition Of Bacterial
Communities Found At Abandoned Copper-Tailing Dumps. Journal of Applied Microbiology. 100(3):
537-544 (2006).
- Gil, F., De la Iglesia, R., Mendoza, L., Gonzales, B., Wilkens, M.
Soil Bacteria Are Differentially Affected By The
Resin Of The Medicinal Plant Pseudognaphalium vira vira and Its Main Kauraneoic Acid.
Microbial Ecology. 52(1): 10-18 (2006).
- Moran, A.C., Muller, A., Manzano, M., Gonzales, B.
Simazine Treatment History Determines a Significant Herbicide Degradation Potential In Soils That Is Not Improved By
Bioaugmentation With Pseudomonas sp. ADP. Journal of Applied Microbiology.
101(1): 26-35 (2006).
- Blackwood, C., Oaks, A., Buyer, S. Phylum- and
Class Specific PCR Primers For General Microbial Community Analysis. Applied and Environmental Microbiology.
71(10): 6193-6198 (2005).
- Kennedy, P.G., Bruns, T.D. Priority Effects Determine The
Outcome Of Ectomycorrhizal Competition Between Two Rhizopogon Species Colonizing Pinus muricata
Seedlings. New Phytologist. 166(2): 631-638 (2005).
- Koide, R.T. Nucleic Acid Isolation From Ecological
Samples – Fungal Associations, Mycorrhizae. Methods in Enzymology. 395: 58-72 (2005).
- Lievens, B., Brouwer, M., Vanachter, A.C., Levesque, C.A., Cammue, B.P.A., Thomma, B.P.
Quantitative Assessment Of Phytopathogenic Fungi In Various
Substrates Using A DNA Macroarray. Environmental Microbiology. 7(11): 1462-2920 (2005).
- Borrok, D., Fein, J.B., Kulpa, C.F. Cd and Proton
Adsorption Onto Bacterial Consortia Grown From Industrial Wastes and Contaminated Geologic Settings.
Environmental Science and Technology. 38(21): 5656-5664 (2004).
- Casas, V., Kline, D., Wegley, L., Yu, Y., Breitbart, M., Rohwer, F.
Widespread Association Of A Rickettsiales-Like
Bacterium With Reef-Building Corals. Environmental Microbiology. 6(11): 1137-1148 (2004).
- Chauhan, A., Ogram, A., Reddy, K.R.
Syntrophic-Methanogenic Associations Along A Nutrient Gradient In The Florida Everglades.
Applied and Environmental Microbiology. 70(6): 3475-3484 (2004).
- Coupland, K., Johnson, D.B.
Geochemistry and Microbiology Of An Impounded Subterranean Water Body At Mynydd Parys, Anglesey, Wales.
Geobiology. 2: 77-86 (2004).
- De Souza, F.A., Kowalchuk, G.A., Leeflang, P., Van Veen, J.A., Smit, E.
PCR-Denaturing Gradient Gel Electrophoresis
Profiling Of Inter-and Intraspecies 18S rRNA Gene Sequence Heterogeneity Is An Accurate and S
ensitive Method To Assess Species Diversity Of Arbuscular Mycorrhizal Fungi Of The Genus Gigaspora.
Applied and Environmental Microbiology. 70(3): 1413-1424 (2004).
- Devare, M.H., Jones, C.M., Thies, J.E.
Effect Of Cry3Bb Transgenic Corn and Tefluthrin On The Soil Microbial Community: Biomass, Activity, and Diversity.
Journal of Environmental Quality. 33(3): 837-843 (2004).
- Duhamel, M., Mo, K., Edwards, E.A.
Characterization Of A Highly Enriched Dehalococcoides-Containing Culture That Grows On Vinyl Chloride and
Trichloroethene. Applied and Environmental Microbiology. 70(9): 5538-5545 (2004).
- Filion, M., Hamelin, R.C., Bernier, L., St-Arnaud, M.
Molecular Profiling Of Rhizosphere Microbial Communities
Associated With Healthy and Diseased Black Spruce (Picea mariana) Seedlings Grown In A Nursery.
Applied and Environmental Microbiology. 70(6): 3541-3551 (2004).
- Hackl, E., Zechmeister-Boltenstern, S., Bodrossy, L., Sessitsch, A.
Comparison Of Diversities and Compositions Of Bacterial
Populations Inhabiting Natural Forest Soils. Applied and Environmental Microbiology.
70(9): 5057-5065 (2004).
- Hogan, J., Sherlock, O., Ryan, D., Whelan, C., Francesconi, S., Rivilla, R., Dowling, D.N.
Fluorescence Resonance Energy Transfer (FRET)
Based Molecular Detection Of A Genetically Modified PCB Degrader In Soil. FEMS Microbiology Letters.
236(2): 349-357 (2004).
- Kang, S., Mills, A.L.
Soil Bacterial Community Structure Changes Following Disturbance Of The Overlying Plant Community.
Soil Science. 169(1): 55-65. (2004).
- Kaplan, C.W., Kitts, C.L. Bacterial Succession In A
Petroleum Land Treatment Unit. Applied and Environmental Microbiology. 70(3): 1777-1786 (2004).
- Kassenga, G., Pardue, J.H., Moe, W.M., Bowman, K.S.
Hydrogen Thresholds As Indicators Of Dehalorespiration In Constructed Treatment Wetlands.
Environmental Science Technology. 38(4): 1024-1030 (2004).
- Kellogg, C.A. Tropical Archaea: Diversity
Associated With The Surface Microlayer Of Corals. Marine Ecology Progress Series. 273: 81-88 (2004).
- De Souza, F.A., Kowalchuk, G.A., Leeflang, P., Van Veen, J.A., Smit, E.
PCR-Denaturing Gradient Gel Electrophoresis Profiling
Of Inter- and Intraspecies 18S rRNA Gene Sequence Heterogeneity Is An Accurate and Sensitive Method To Assess
Species Diversity Of Arbuscular Mycorrhizal Fungi Of The Genus Gigaspora.
Applied Environmental Microbiology. 70(3): 1413-1424 (2004).
- Leveau, J., Gerards, S., De Boer, W., Van Veen, J. Molecular Identification Of The Catabolic Vinyl Chloride
Reductase From Dehalococcoides sp. Strain VS and Its Environmental Distribution.
Applied and Environmental Microbiology. 70(8): 4880-4888 (2004).
- Mummey, D.L., Stahl, P.D. Analysis Of Soil Whole- and
Inner-Microaggregate Bacterial Communities. Microbial Ecology. 48(1): 41-50 (2004).
- North, N.N., Dollhopf, S.L., Petrie, L., Istok, J.D., Balkwill, D.L., Kostka, J.E.
Change In Bacterial Community Structure During In Situ
Biostimulation Of Subsurface Sediment Cocontaminated With Uranium and Nitrate.
Applied and Environmental Microbiology. 70(8): 4911-4920 (2004).
- Pearson, A., Huang, Z., Ingalls, A.E., Romanek, C.S., Wiegel, J., Freeman, K.H., Smittenberg, R.H., Zhang, C.L.
Nonmarine Crenarchaeol In Nevada Hot Springs.
Applied and Environmental Microbiology. 70(9): 5229-5237 (2004).
- Salles, J., van Veen, J.A., van Elsas, J.D.
Multivariate Analyses Of Burkholderia Species In Soil: Effect Of Crop and Land Use History.
Applied and Environmental Microbiology. 70(7): 4012-4020 (2004).
- Simpson, J.M., Santo Domingo, J.W., Reasoner, D.J. Assessment Of Equine Fecal Contamination: The Search For Alternative Bacterial Source-Tracking Targets.
FEMS Microbiology Ecology. 47(1): 65-75 (2004).
- Smith, A.H., Mackie, R.I. Effect Of Condensed Tannins On
Bacterial Diversity and Metabolic Activity In The Rat Gastrointestinal Tract.
Applied and Environmental Microbiology. 70(2): 1104-1115 (2004).
- Stevenson, B.S., Eichorst, S.A., Wertz, J.T., Schmidt, T.M., Breznak, J.A.
New Strategies For Cultivation and Detection Of
Previously Uncultured Microbes. Applied and Environmental Microbiology. 70(8): 4748-4755 (2004).
- Stres, B., Mahne, I., Avgustin, G., Tiedje, J.M.
Nitrous Oxide Reductase (nosZ) Gene Fragments Differ Between Native and Cultivated Michigan Soils.
Applied and Environmental Microbiology. 70(1): 301-309 (2004).
- Wang, G., Gentry, T.J., Grass, G., Josephson, K., Rensing, C., Pepper, I.L.
Real-Time PCR Quantification Of A Green Fluorescent
Protein – Labeled, Genetically Engineered Pseudomonas putida Strain During 2-Chlorobenzonate
Degradation In Soil. FEMS Microbiology Letters. 233(2): 307-314 (2004).
- Ahn, Y., Rhee, S., Fennell, D., Kerkhof, L., Hentschel, U., Haggblom, M.
Reductive Dehalogenation Of Brominated
Phenolic Compounds By Microorganisms Associated With The Marine Sponge Aplysina aerophoba.
Applied and Environmental Microbiology. 69(7): 4159-4166 (2003).
- Atkins, S.D., Clark, I.M., Sosnowska, D., Hirsch, P.R., Kerry, B.R.
Detection and Quantification Of
Plectosphaerella cucumerina, A Potential Biological Control Agent Of Potato Cyst Nematodes, By
Using Conventional PCR, Real-Time PCR, Selective Media, and Baiting. Applied and Environmental Microbiology.
69(8): 4788-4793 (2003).
- Atkins, S.D., Hidalgo-Diaz, L., Clark, I.M., Morton, C.O., Montes de Oca, N., Gray, P.A., Kerry, B.R.
Approaches For Monitoring The Release Of
Pochonia chlamydosporia var. catenulata, A Biocontrol Agent Of Root-Knot Nematodes.
Mycological Research. 107(pt 2): 206-212 (2003).
- Bernot, M.J., Dodds, W.K., Gardner, W.S., McCarthy, M.J., Sobolev, D., Tank, J.L.
Comparing Dentrification Estimates For A Texas Estuary By
Using Acetylene Inhibition and Membrane Inlet Mass Spectrometry. Applied and Environmental Microbiology.
69(10): 5950-5956 (2003).
- Blackwood, C., Marsh, T., Kim, S., Paul, E.
Terminal Restriction Fragment Length Polymorphism Data Analysis For Quantitative Comparison Of Microbial Communities.
Applied and Environmental Microbiology. 69(2): 926-932 (2003).
- Blackwood, C.B., Paul, E.A. Eubacterial Community Structure and Population Size Within The Soil Light Fraction,
Rhizosphere, and Heavy Fraction Of Several Agricultural Systems. Soil Biology & Biochemistry.
35(9): 1245-1255 (2003).
- Buchan, A., Newell, S.Y., Butler, M., Biers, E.J., Hollibaugh J.T., Moran, M.A.
Dynamics Of Bacterial and Fungal Communities On
Decaying Salt Marsh Grass. Applied and Environmental Microbiology. 69(11): 6676-6687 (2003).
- Christner, B.C, Kvitko, B.H., Reeve, J.N.
Molecular Identification Of Bacteria and Eukarya Inhabiting An Antarctic Cryoconite Hole.
Extremophiles. 7(3): 177-183 (2003).
- De Boer, W., Verheggen, P., Klein Gunnewiek, P., Kowalchuk, G., Van Veen, J.
Microbial Community Composition Affects Soil Fungistasis.
Applied and Environmental Microbiology. 69(2): 835-844 (2003).
- Dhillon, A., Teske, A., Dillon, J., Stahl, D., Sogin, M.
Molecular Characterization Of Sulfate-Reducing Bacteria In The Guaymas Basin.
Applied and Environmental Microbiology. 69(5): 2765-2772 (2003).
- Duan, Y.P., Castro, H., Hewlett, T., White, J., Ogram, A.
Detection and characterization of Pasteuria 16S rRna Gene Sequences From Nematodes and Soils.
International Journal of Systematic and Evolutionary Microbiology. 53(Pt 1): 105-112 (2003).
- Franklin, R.B., Mills, A.L. Multi-Scale Variation In
Spatial Heterogeneity For Microbial Community Structure In An Eastern Virginia Agricultural Field.
FEMS Microbiology Ecology. 44(3): 335-346 (2003).
- Gomes, N.C.M., Fagbola, O., Costa, R., Rumjanek, N.G., Buchner, A., Mendona-Hagler, L., Smalla, K.
Dynamics Of Fungal Communities In Bulk and
Maize Rhizosphere Soil In The Tropics. Applied and Environmental Microbiology. 69(7): 3758-3766 (2003).
- Inagaki, F, Suzuki, M., Takai, K., Oida, H., Sakamoto, T., Aoki, K., Nealson, K., Horikoshi, K.
Microbial Communities Associated With Geological Horizons
In Coastal Subseafloor Sediments From The Sea Of Okhotsk. Applied and Environmental Microbiology.
69(12): 7224-7235 (2003).
- Kormas, K., Smith, D., Edgcomb, V., Teske, A. Molecular Analysis Of Deep Subsurface Microbial Communities In Nankai Trough sediments
(ODP Leg 190, Site 1176). FEMS Microbiology Ecology. 45(2): 115-125 (2003).
- Kowalchuk G.A., Van Os, G.J., van Aartrijk, J., van Veen, J.A. Microbial Community Responses To Disease Management Soil Treatments Used In Flower Bulb
Cultivation. Biology & Fertility of Soils. 37(1): 55-63 (2003).
- Lendvay, J.M., Loffler, F.E., Dollhopf, M., Aiello, M.R, Daniels, G., Fathepure, B.Z., Gebhard, M., Heine, R.,
Helton, R., Shi, J., Krajmalnik-Brown, R., Major, C.L., Barcelona, M.J. Jr., Petrovskis, E., Hickey, R., Tiedje, J.M.,
Adriaens, P.
Bioreactive Barriers: A Comparison Of Bioaugmentation and Biostimulation For Chlorinated Solvent Remediation.
Environmental Science Technology. 37(7): 1422-1431 (2003).
- Lievens, B., Brouwer, M., Vanachter, A.C., Levesque, C.A., Cammue, B.P., Thomma, B.P.
Design and Development Of A DNA Array For Rapid Detection
and Identification Of Multiple Tomato Vascular Wilt Pathogens. FEMS Microbiology Letters.
223(1): 113-122 (2003).
- Litaker, R.W., Vandersea, M.W., Kibler, S.R., Reece, K.S., Stokes, N.A., Steidinger, K.A., Millie, D.F.,
Bendis, B.J., Pigg, R.J.
Identification Of Pfiesteria piscicida (Dinophyceae) and Pfiesteria-Like Organisms Using Internal
Transcribed Spacer-Specific Assays.
Journal Phycology. 39(4): 754-761 (2003).
- Lyons, J.I., Newell, S.Y., Buchan, A., Moran, M.A.
Diversity Of Ascomycete Laccase Gene Sequences In A Southeastern US Salt Marsh. Microbial Ecology.
45(3): 270-281 (2003).
- Mackie, R.I., Aminov, R.I., Hu, W., Klieve, A.V., Ouwerkerk, D., Sundset, M.A., Kamagata, Y.
Ecology Of Uncultivated Oscillospira
Species In The Rumen Of Cattle, Sheep and Reindeer As Assessed By Microscopy and Molecular Approaches.
Applied and Environmental Microbiology. 69(11): 6808-6815 (2003).
- Mummey, D.L., Stahl, P.D.
Spatial and Temporal Variability Of Bacterial 16S rDNA-Based T-RFLP Patterns Derived From Soil Of Two Wyoming Grassland
Ecosystems. FEMS Microbiology Ecology. 46(1): 113-120 (2003).
- Mummey, D.L., Stahl, P.D. Candidate Division BD:
Phylogeny, Distribution and Abundance In Soil Ecosystems. Systematic and Applied Microbiology.
26(2): 228-235 (2003).
- Nejstgaard, J.C., Frischer, M.E., Raule, C.L., Gruebel, R., Kohlberg, K.E., Verity, P.G.
Molecular Detection Of Algal Prey In Copepod Guts and Fecal Pellets.
Limnology and Oceanography: Methods. 1: 29-38 (2003).
- Nikolcheva, L., Cockshutt, A., Barlocher, F.
Determining Diversity Of Freshwater Fungi On Decaying Leaves: Comparison Of Traditional and Molecular Approaches.
Applied and Environmental Microbiology. 69(5): 2548-2554 (2003).
- Nour, S., Lawrence, J., Zhu, H., Swerhone, G., Welsh, M., Welacky, T., Topp, E.
Bacteria Associated With Cysts Of The Soybean Cyst Nematode
(Heterodera glycines). Applied and Environmental Microbiology. 69(1): 607-615 (2003).
- Olivera, N.L., Commendatore, M.G., Delgado, O., Esteves, J.L.
Microbial Characterization and Hydrocarbon Biodegradation Potential Of Natural Bilge Waste Microflora.
Journal of Industrial Microbiology and Biotechnology. 30(9): 542-548 (2003).
- Petrie, L., North, N.N., Dollhopf, S.L., Balkwill, D.L., Kostka, J.E.
Enumeration and Characterization Of Iron(III)-Reducing
Microbial Communities From Acidic Subsurface Sediments Contaminated With Uranium(VI).
Applied and Environmental Microbiology. 69(12): 7467-7479 (2003).
- Radnedge, L., Agron, P., Hill, K., Jackson, P., Ticknor, L., Kleim, P., Andersen, G.
Genome Differences That Distinguish Bacillus anthracis
From Bacillus cereus and Bacillus thuringiensis. Applied and Environmental Microbiology.
69(5): 2755-2764 (2003).
- Rodriguez, R.A., Toranzos, G. Stability Of Bacterial
Populations In Tropical Soil Upon Exposure To Lindane. International Microbiology. 6(4): 253-258 (2003).
- Schlesinger, W.H., Pippen, J.S., Wallenstein, M.D., Hofmockel, K.S., Klepeis, D.M., Mahall, B.E. Community Composition and
Photosynthesis By Photoautotrophs Under Quartz Pebbles, Southern Mojave Desert.
Ecology. 84(12): 3222-3231 (2003).
- Schonfeld, J., Heuer, H., van Elsas, J.D., Smalla, K.
Specific and Sensitive Detection Of Ralstonia solanacearum In Soil On The Basis Of PCR Amplification Of
fliC Fragments. Applied and Environmental Microbiology. 69(12): 7248-7256 (2003).
- Singh, B.K., Walker, A., Morgan, J.A.W., Wright, D.J.
Effects Of Soil pH On The Biodegradation Of Chlorpyrifos and Isolation Of A Chlorpyrifos-Degrading Bacterium.
Applied and Environmental Microbiology. 69(9): 5198-5206 (2003).
- Singh, B.K., Walker, A., Morgan, J.A.W., Wright, D.J.
Role Of Soil pH In The Development Of Enhanced Biodegradation Of Fenamiphos.
Applied and Environmental Microbiology. 69(12): 7035-7043 (2003).
- Smith, A., Imlay, J., Mackie, R. Increasing The
Oxidative Stress Response Allows Escherichia coli To Overcome Inhibitory Effects Of Condensed Tannins.
Applied and Environmental Microbiology. 69(6): 3406-3411 (2003).
- Stepanauskas, R., Moran, M.A., Bergamaschi, B.A., Hollibaugh, J.T.
Covariance Of Bacterioplankton Composition
and Environmental Variables In A Temperate delta System.Aquatic Microbial Ecology. 31(1): 85-98 (2003).
- Truu, J., Karme, L., Talpsep, E., Vedler, E., Heinaru, A. Phytoremediation Of Solid Oil Shale Waste From The Chemical Industry.
Acta Biotechnology. 23(2-3): 301-307 (2003).
- Aminov, R.I., Chee-Sanford, J.C., Garrigues, N., Teferedegne, B., Krapac, I.J., White, B.A., Mackie, R.I.
Development, Validation, and Application Of PCR Primers For
Detection Of Tetracycline Efflux Genes Of Gram-Negative Bacteria. Applied and Environmental Microbiology.
68(4): 1786-1793 (2002).
- Castro, H., Reddy, K.R., Ogram, A. Composition and
Function Of Sulfate-Reducing Prokaryotes In Eutrophic and Pristine Areas Of The Florida Everglades.
Applied and Environmental Microbiology. 68(12): 6129-6137 (2002).
- Cho, J., Tiedje, J.M. Quantitative Detection Of
Microbial Genes By Using DNA Microarrays. Applied and Environmental Microbiology. 68(3): 1425-1430 (2002).
- Galand, P.E., Saarnio, S., Fritze, H., Yrjala, K. Depth Related Diversity Of Methanogen Archaea In Finnish Oligotrophic Fen. FEMS Microbiology Ecology.
42(3): 441-449 (2002).
- Ibekwe, A.M., Watt, P., Grieve, C., Sharma, V., Lyons, S.
Multiplex Fluorogenic Real-Time PCR For Detection and Quantification Of Escherichia coli O157:H7 In Dairy
Wastewater Wetlands. Applied and Environmental Microbiology. 68(10): 4853-4862 (2002).
- Jordan, M., Sanchez, M.A., Padilla, L., Cespedes, R., Osses, M., Gonzales, B.
Kraft Mill Residues Effects On Monterey Pine Growth and
Soil Microbial Activity. Journal of Environmental Quality. 31(3): 1004-1009 (2002).
- Kostka, J., Dalton, D., Skelton, H., Dollhopf, S., Stucki, J.
Growth Of Iron(III)-Reducing Bacteria On Clay Minerals As The Sole Electron Acceptor and Comparison Of Growth Yields
On A Variety Of Oxidized Iron Forms. Applied and Environmental Microbiology. 68(12): 6256-6262 (2002).
- Kowalchuk, G.A., De Souza, F.A., Van Veen, J.A. Community
Analysis Of Arbuscular Mycorrhizal Fungi Associated With Ammophila arenaria In Dutch Coastal Sand Dunes.
Molecular Ecology. 11(3): 571-81 (2002).
- Kowalchuk, G.A., Buma, D.S., De Boer, W., Klinkhamer, P.G.L., Van Veen, J.A.
Effects Of Above-Ground Plant Species Composition and
Diversity On The Diversity Of Soil-Borne Microorganisms. Antonie van Leeuwenhoek. 81(1-4): 509-520 (2002).
- Mauchline, T.H., Kerry, B.R., Hirsch, P.R.
Quantification In Soil and The Rhizosphere Of The Nematophagous Fungus Verticillium chlamydosporium By
Competitive PCR and Comparison With Selective Plating. Applied and Environmental Microbiology.
68(4): 1846-1853 (2002).
- Pitulle, C., Strehse, D., Brown, J.W., Breitschwerdt, E.B.
Investigation Of The Phylogenetic Relationships Within The Genus Bartonella Based On Comparative Sequence
Analysis Of The rnpB Gene, 16S rDNA and 23S rDNA.
International Journal of Systematic and Evolutionary Microbiology. 52(pt 6): 2075-2080 (2002).
- Prieme, A., Braker, G., Tiedje, J. Diversity Of Nitrite
Reductase (nirK and nirS) Gene Fragments In Forested Upland and Wetland Soils.
Applied and Environmental Microbiology. 68(4): 1893-1900 (2002).
- Reed, D.W., Fujita, Y., Delwiche, M.E., Blackwelder, D.B., Sheridan, P.P., Uchida, T., Colwell, F.S. Microbial Communities From Methane Hydrate-Bearing Deep Marine Sediments
In A Forearc Basin. Applied and Environmental Microbiology. 68(8): 3579-3770 (2002).
- Rodrigues, J.L.M., Aiello, M.R., Urbance, J.W., Tsoi, T.V., Tiedje, J.M.
Use Of Both 16S rRNA and Engineered Functional Genes With
Real-Time PCR To Quantify An Engineered, PCB-Degrading Rhodococcus In Soil.
Journal of Microbiological Methods. 51(2): 181-189 (2002).
- Salles, J., De Souza, F., Van Elsas, J.
Molecular Method To Assess The Diversity Of Burkholderia Species In Environmental Samples.
Applied and Environmental Microbiology. 68(4): 1595-1603 (2002).
- Tiquia, S.M., Lloyd, J., Herms, D.A., Hoitink, H.A.J., Michel, F.C. Effects Of Mulching and Fertilization On Soil
Nutrients, Microbial Activity and Rhizosphere Bacterial Community Structure Determined By Analysis Of TRFLPs
Of PCR-Amplified 16S rRNA Genes. Applied Soil Ecology. 21(1): 31-48 (2002).
- Aminov, R.I., Garrigues-Jeanjean, N., Mackie, R.I.
Molecular Ecology Of Tetracycline Resistance: Development and Validation Of Primers For Detection Of Tetracycline
Resistance Genes Encoding Ribosomal Protection Proteins. Applied and Environmental Microbiology.
67(1): 22-32 (2001).
- Gruntzig, V., Nold, S., Zhou, J., Tiedje, J.M.
Pseudomonas stutzeri Nitrite Reductase Gene Abundance In Environmental Samples Measured By Real-Time PCR.
Applied and Environmental Microbiology. 67(2): 760-768 (2001).
- Kaplan, C.W., Astaire, J.C., Sanders, M.L., Reddy, B.S., Kitts, C.L.
16S Ribosomal DNA Terminal Restriction Fragment Pattern
Analysis Of Bacterial Communities In Feces Of Rats Fed Lactobacillus acidophilus NCFM.
Applied and Environmental Microbiology. 67(4): 1935-1939 (2001).
- Niemi, R.M., Heiskanen, I., Wallenius, K., Lindstrom, K.
Extraction and Purification Of DNA In Rhizosphere Soil Samples For PCR-DGGE Analysis Of Bacterial Consortia.
Journal of Microbiological Methods. 45(3): 155-165 (2001).
- Rohwer, F., Breitbart, M., Jara, J., Azam, F., Knowlton, N. Diversity Of Bacteria Associated With The Caribbean Coral Montastraea franksi.
Coral Reefs. 20: 85-91 (2001).
- Stults, J., Snoeyenbos-West, O., Methe, B., Lovley, D., Chandler, D.
Application Of The 5 Fluorogenic Exonuclease Assay (TaqMan) For Quantitative Ribosomal DNA and rRNA Analysis In
Sediments. Applied and Environmental Microbiology. 67(6): 2781-2789 (2001).
- Loffler, F.E., Sun, Q., Li, J., Tiedje, J.M. 16S rRNA
Gene-Based Detection Of Tetrachloroethene-Dechlorinating Desulfuromonas and Dehalococcoides Species.
Applied and Environmental Microbiology. 66(4): 1369-1374 (2000).
- Takai, K., Horikoshim, K. Rapid Detection and Quantification
Of Members Of The Archaeal Community By Quantitative PCR Using Fluorogenic Probes.
Applied and Environmental Microbiology. 66(11): 5066-5072 (2000).
- Tanner, M., Everett, C., Youvan, D. Molecular Phylogenetic
Evidence For Noninvasive Zoonotic Transmission Of Staphylococcus intermedius From A Canine Pet To A Human.
Journal of Clinical Microbiology. 38(4): 1628-1631 (2000).
- Braid, M.D., Nicholas, L.M., Clement, B.G., Kitner, J.B., Kitts, C.L., Brolaski, M.N., Venugopal, R.J.
Testing The UltraClean Soil DNA Purification Kit On A Diverse Range Of Soils By PCR Amplification Of 16S rDNA.
Poster Presentation at the American Society of Microbiology Meeting Chicago, Illinois. (1999).
- Ishii, S., Loynachan, T.E.
Rapid and Reliable DNA Extraction Techniques From Trypan-Blue-Stained Mycorrhizal Roots: Comparison Of Two Methods.
Mycorrhiza. 14(4): 271-275 (2004).
- Lu, J., Idris, U., Harmon, B., Hofacre, C., Maurer, J.J., Lee, M.D.
Diversity and Succession Of The Intestinal Bacterial
Community Of The Maturing Broiler Chicken. Applied and Environmental Microbiology. 69(11): 6816-6824 (2003).
- Beller, H.R., Kane, S.R., Legler, T.C., Alvarez, P.J.
A Real-Time Polymerase Chain Reaction Method For Monitoring Anaerobic, Hydrocarbon-Degrading Bacteria Based
On A Catabolic Gene. Environmental Science and Technology. 36(18): 3977-3894 (2002).
- Crump, B.C., Koch, E.WAttached Bacterial Populations Shared by Four Species of Aquatic Angiosperms. Applied and Enviromental Microbiologu. 74(19): 5948-5957 (2008).
- Li, J., Santo Somingo, J.W., Lamendella, R., Edge, T., Hill, S. Phylogenetic Diversity and Molecular Detection of Bacteria in Gull Feces. Applied and Environmental Microbiology. 74(13): 3969-3976 (2008).
- Stauffer, S.H., Birkenheuer, A.J., Levy, M.G., Marr, H., Gookin, J.L. Evaluation of Four DNA Extraction Methods for the Detection of Tritrichomonas foetus in Feline Stool Specimens by Polymerase Chain Reaction. Journal of Veterinary Diagnostic Investigation 20: 639-641 (2008).
- Casper, R.M., Jarman, S.N., Deagle, B.E., Gales, N.J., Hindell, M.A.
Detecting Prey From DNA In Predator Scats: A Comparison With
Morphological Analysis, Using Arctocephalus Seals Fed a Known Diet. Journal of Experimental Marine BIology
and Ecology. 347(1-2): 144 (2007).
- Casper, R.M., Jarman, S.N., Gales, N.J., Hindell, M.A. Combining DNA and Morphological Analyses Of Faecal Samples Improves Insight Into Trophic
Interactions: A Case Study Using A Generalist Predator. Marine Biology. 152(4): 815-825 (2007).
- Hong, C., Decaro, N., Desario, D., Tanner, P., Pardo, M.C., Sanchez, S., Buonavoglia, C., Saliki, J.T.
Occurrence Of Canine Parvovirus Type 2C In The United States.
Journal of Veterinary Diagnostic Investigations. 19(5): 535-539 (2007).
- Wertz, J.T., Breznak, J.A. Physiological Ecology Of
Stenoxybacter acetivorans, An Obligate Microaerophile In Termite Guts.
Applied and Environmental Microbiology. 73(21): 6829-6841 (2007).
- Dumonceaux, T.J., Hill, J.E., Briggs, S.A., Amoakoa, K.K., Hemingsen, S.M., Van Kesse, A.G.
Enumeration Of Specific Bacterial Populations In Complex
Intestinal Communities Using Quantitative PCR Based On The Chaperonin-60 Target.
Journal of Microbiological Methods. 64(1): 46-62 (2006).
- Stevenson, B.S., Eichorst, S.A., Wertz, J.T., Schmidt, T.M., Breznak, J.A.
New Strategies For Cultivation and Detection
Of Previously Uncultured Microbes. Applied and Environmental Microbiology. 70(8): 4748-4755 (2004).
- McGarvey, J.A., Miller, W.G., Sanchez, S., Stanker, L.
Identification Of Bacterial Populations In Dairy Wastewaters By Use Of 16S rRNA Gene Sequences and Other
Genetic Markers. Applied and Environmental Microbiology. 70(7): 4267-4275 (2004).
- Ibekwe, A.M., Grieve C,M., Lyon, S.R.
Characterization Of Microbial Communities and Composition In Constructed Dairy Wetland Wastewater Effluent.
Applied and Environmental Microbiology. 69(9): 5060-5069 (2003).
- Trochimchuk, T., Fotheringham, J., Topp, E., Schraft, H., Leung, K.T.
A Comparison of DNA Extraction and Purification Methods To
Detect Escherichia coli O157:H7 In Cattle Manure. Journal of Microbiological Methods. 54(2): 165-175
(2003).
- Ibekwe, A.M., Watt, P.M., Grieve, C.M., Sharma, V.K., Lyons, S.R.
Multiplex Fluorogenic Real-Time PCR For Detection and
Quantification Of Escherichia coli O157:H7 In Dairy Wastewater Wetlands.
Applied and Environmental Microbiology. 68(10): 4853-4862 (2002).
- Clement, B.G., Kitts, C.L. Isolating PCR Quality DNA From Human Feces With A Soil DNA Kit.
Biotechniques. 28(4): 640-642,644,646 (2000).
- Accinelli, C., Abbas, H.K., Zablotowicz, R.M., Wilkinson, J.R.
Aspergillus flavus Aflatoxin Occurrence and Expression
Of Aflatoxin Biosynthesis Genes In Soil. Canadian Journal of Microbiology. 54(5): 371-379 (2008).
- Lee, P.K., Macbeth, T.W., Sorenson, K.S. Jr., Deeb, R.A., Alvarez-Cohen, L.
Quantifying Genes and Transcripts To Assess The In Situ
Physiology Of "Dehalococcoides" spp. In A Trichloroethene-Contaminated Groundwater Site.
Applied and Environmental Microbiology. 74(9): 2728-2739 (2008).
- McGrath, K.C., Thomas-Hall, S.R., Cheng, C.T., Leo, L., ALexa, A., Schmidt, S., and Schenk, P.M. Isolation and Analysis of mRNA from Environmental Microbial Communities. Journal of Microbiological Methods. 75: 712-176 (2008).
- Pittman, G.W., Brumbley, S.M., Allsopp, P.G., O'Neill, S.L.
Assessment Of Gut Bacteria For A Paratransgenic Approach To Control Dermolepida albohirtum Larvae.
Applied and Environmental Microbiology. 74(13):4036-4043 (2008).
- Xing, D., Ren, N., Rittmann, B.E. Genetic Diversity Of
Hydrogen-Producing Bacteria In An Acidophilic Ethanol-H2-Coproducing System, Analyzed Using The
[Fe]-Hydrogenase Gene. Applied and Environmental Microbiology. 74(4): 1232-1239 (2008).
- Yu, Y.J., Majumdar, P.N., Nechvatal, J.M., Ram, J.L., Basson, M.D., Heilbrun, L.K., Kato, I. Exfoliated Cells in Stool: A Source for Reverse Transcription-PCR-Based Analysis of Biomarkers of Gastrointestinal Cancer. Cancer Epidemiol Biomarkers Prev. 17(2): 455-458 (2008).
- Elshahed, M.S., Youssef, N.H., Spain, A.M., Sheik, C., Najar, F.Z., Sukharnikov, L.O., Roe, B.A., Davis, J.P.,
Schloss, P.D., Bailey, V.L., Krumholz, L.R.
Novelty and Uniqueness Patterns Of Rare Members Of The Soil Biosphere. Applied and Environmental Microbiology.
(2008).
- Andreote, F.D., Mendes, R., Dini-Andreote, F., Rossetto, P.B., Labate, C.A., Pizzirani-Kleiner, A.A.,
Van Elsas, J.D., Azevedo, J.L., Araújo, W.L.
Transgenic Tobacco Revealing Altered Bacterial Diversity In The Rhizosphere During Early Plant Development.
Antonie Van Leeuwenhoek. 93(4): 415-424 (2008).
- Floyd, A.L. Effects of Inundation
Regime and Plant Community On Soil Bacterial Communities In An Eastern Shore, VA Salt Marsh.
University of Virginia. (2007).
- Hawkins, I.
Detecting Leptospira In Water: Evaluation Of a Proposed Method. University of Hawaii. (2007).
- Katz, D.E.
The Hidden Benefits Of Real-Time PCR: Assessing and Addressing
Qualitative Challenges. Profiles in DNA. (2007).
- Kaestli, M., Mayo, M., Harrington, G., Watt, F., Hill, J., Gal, D., Currie, B.J.
Sensitive and Specific Molecular Detection Of
Burkholderia pseudomallei, The Causative Agent Of Melioidosis, In The Soil Of Tropical Nothern Australia.
Applied and Environmental Microbiology. 73(21): 6891-6897 (2007).
- Hortal, S., Pera, J., Parlade, J. Tracking Mycorrhizas
and Extraradical Mycelium Of The Edible Fungus Lactarius deliciosus Under Field Competition With
Rhizopogon spp. Mycorrhiza. 18(2): 69-77 (2008).
- Leonardi, V., Giubilei, M.A., Federici, E., Spaccapelo, R., Sasek, V., Novotny, C., Petrucciolo, M., D'Annibale, A. Mobilizing agents enhance fungal degradation of polycyclic aromatic hydrocarbons and affect diversity of indigenous bacteria in soil.. Biotechnology and Bioengineering. 101: 273-285 (2008).
- Wakelin, S.A., Macdonald, L.M., Rogers, S.L., Gregg, A.L., Bloger, T.P., Baldock, J.A.
Habitat Selective Factors Influencing The Structural Composition and Functional Capacity Of Microbial Communities In
Agricultural Soils. Elsevier. 40(3): 803-813 (2008).
- Blackwood, C.B., Waldrop, M.P., Zak, D.R., Sinsabaugh, R.L.
Molecular Analysis Of Fungal Communities and
Laccase Genes In Decomposing Litter Reveals Differences Among Forest Types But No Impact Of Nitrogen Deposition.
Environmental Microbiology. 9(5): 1306-1316 (2007).
- Federici, E., Leonardi, V., Giubilei, M.A., Quaration, D., Spaccapelo, R., D'Annibale, A., Petruccioli, M.
Addition Of Allochthonous Fungi To a Historically
Contaminated Soil Effects Both Remediation Efficiency and Bacterial Diversity.
Applied and Environmental Biotechnology. 77(1): 203-211 (2007).
- Marchetti, E., Accinelli, C., Talame, V., Epifani, R.
Persistence Of Cry Toxins and cry Gene From Genetically Modified Plants In Two Agricultural Soils.
Agronomy for Sustainable Development. 27(3): 231-236 (2007).
- Mummey, D.L., Rillig, M.C.
Evaluation Of LSU rRNA-Gene PCR Primers For The Study Of Arbuscular Mycorrhizal Fungal Communities Via Terminal
Restrictions Fragment Length Polymorphism Analysis. Journal of Microbiological Methods. 70(1):
200-204 (2007).
- Poulain, A.J., Ní Chadhain, S.M., Ariya, P.A., Amyot, M., Garcia, E., Campbell, P.G., Zylstra, G.J., Barkay, T.
Potential For Mercury Reduction By Microbes In The High Arctic.
Applied and Environmenal Microbiology. 73(7): 2230-2238 (2007).
- Ufnar, J.A., Ufnar, D.F., Wang, S.Y., Ellender, R.D.
Development of A Swine-Specific Fecal Pollution Marker Based On Host Differences In Methanogen mcrA Genes.
Applied and Environmental Microbiology. 73(16): 5209-5217 (2007).
- Mummey, D.L., Rillig, M.C., Six, J. Endogeic Earthworms Differentially Influence Bacterial Communities
Associated With Different Soil Aggregate Size Fractions. Soil Biology & Biochemistry. 35(7): 1608-1614
(2006).
- Hortal, S., Pera, J., Galipienso, L., Parladé, J.,
Molecular Identification Of The Edible Ectomycorrhizal Fungus Lactarius deliciosus In The Symbiotic and
Extraradical Mycelium Stages. Journal of Biotechnology. 126(2): 123-134 (2006).
- Mummey, D.L., Rillig, M.C.
The Invasive Plant Species Centaurea maculosa Alters Arbuscular Mycorrhizal Fungal Communities In The Field.
Plant Soil. 288: 81-90 (2006).
- Dunfield, K.E., King, G.M. Molecular Analysis Of Carbon
Monoxide-Oxidizing Bacteria Associated With Recent Hawaiian Volcanic Deposits.
Applied and Environmental Microbiology. 70(7): 4242-4248 (2004).
- Rhee, S.K., Liu, X., Wu, L., Chong, S.C., Wan, X., Zhou, J.
Detection Of Genes Involved In Biodegradation and Biotransformation In Microbial Communities By Using 50-Mer
Oligonucleotide Microarrays. Applied and Environmental Microbiology. 70(7): 4303-4317 (2004).
- Atkins, S.D, Clark, I.M., Sosnowska, D., Hirsch, P.R., Kerry, B.R.
Detection and Quantification Of
Plectosphaerella cucumerina, A Potential Biological Control Agent Of Potato Cyst Nematodes, By Using
Conventional PCR, Real-Time PCR, Selective Media, and Baiting. Applied and Environmental Microbiology.
69(8): 4788-4793 (2003).
- Blackwood, C.B., Marsh, T., Kim, S.H., Paul, E.A.
Terminal Restriction Fragment Length Polymorphism Data Analysis For Quantitative Comparison Of Microbial
Communities. Applied and Environmental Microbiology. 69(2): 926-932 (2003).
- Buchan, A., Newell, S.Y., Butler, M., Biers, E.J., Hollibaugh, J.T., Moran, M.A.
Dynamics Of Bacterial and Fungal Communities On Decaying
Salt Marsh Grass. Applied and Environmental Microbiology. 69(11): 6676-6687 (2003).
- Inagaki, F., Suzuki, M., Takai, K., Oida, H., Sakamoto, T., Aoki, K., Nealson, K.H., Horikoshi, K.
Microbial Communities Associated With Geological Horizons In
Coastal Subseafloor Sediments From The Sea Of Okhotsk. Applied and Environmental Microbiology.
69(12): 7224-7235 (2003).
- Stach, J.E., Maldonado, L.A., Masson, D.G., Ward, A.C., Goodfellow, M., Bull, A.T.
Statistical Approaches For Estimating Actinobacterial
Diversity In Marine Sediments. Applied and Environmental Microbiology. 69(10): 6189-6200 (2003).
- Suzuki, Y., Kelly, S.D., Kemner, K.M., Banfield, J.F.
Microbial Populations Stimulated For Hexavalent Uranium Reduction In Uranium Mine Sediment.
Applied and Environmental Microbiology. 69(3): 1337-1346 (2003).
- Brofft, J.E., McArthur, J.V., Shimkets, L.J. Recovery Of
Novel Bacterial Diversity From A Forested Wetland Impacted By Reject Coal. Environmental Microbiology.
4(11): 764-769 (2002).
- Buchan, A., Newell, S.Y., Moreta, J.I., Moran, M.A. Analysis
Of Internal Transcribed Spacer (ITS) Regions Of rRNA Genes In Fungal Communities In a Southeastern U.S. Salt Marsh.
Microbial Ecology. 43(3): 329-340 (2002).
- Major, D.W., McMaster, M.L., Cox, E.E., Edwards, E.A., Dworatzek, S.M., Hendrickson, E.R, Starr, M.G.,
Payne, J.A., Buonamici, L.W. Field Demonstration Of
Successful Bioaugmentation To Achieve Dechlorination Of Tetrachloroethene To Ethene.
Environmental Science Technology. 36(23): 5106-5116 (2002).
- Takai, K., Hirayama, H., Sakihama, Y., Inagaki, F., Yamato, Y., Horikoshi, K.
Isolation and Metabolic Characteristics Of Previously
Uncultured Members Of The Order Aquificales In A Subsurface Gold Mine.
Applied and Environmental Microbiology. 68(6): 3046-3054 (2002).
- Allen, A.E., Booth, M.G., Frischer, M.E., Verity, P.G., Zehr, J.P., Zani, S.
Diversity and Detection Of Nitrate Assimilation Genes
In Marine Bacteria. Applied and Environmental Microbiology. 67(11): 5343-5348 (2001).
- Buchan, A., Neidle, E.L., Moran, M.A. Diversity Of The
Ring-Cleaving Dioxygenase Gene pcaH In A Salt Marsh Bacterial Community.
Applied and Environmental Microbiology. 67(12): 5801-5809 (2001).
- Takai, K., Moser, D.P., DeFlaun, M., Onstott, T.C., Fredrickson, J.K.
Archaeal Diversity In Waters From Deep South
African Gold Mines. Applied and Environmental Microbiology. 67(12): 5750-5760 (2001).
- Takai, K., Komatsu, T., Inagaki, F., Horikoshi, K.
Distribution of Archaea In A Black Smoker Chimney Structure. Applied and Environmental Microbiology.
67(8): 3618-3629 (2001).
- Kennedy, P.G., Bergemann, S.E., Hortal, S., Bruns, T.D.
Determining The Outcome Of Field-based Competition Between Two Rhizopogon Species Using Real-time PCR.
Molecular Ecology. 16(4): 881-890 (2007).
- Kennedy, P.G., Hortal, S., Bergemann, S.E., Bruns, T.D.
Competitive Interactions Among
Three Ectomycorrhizal Fungi and Their Relation To Host Plant Performance. Journal of Ecology.
95(6): 1338-1345 (2007).
- Nadarajah, N., Allen, D.G., Fulthorpe, R.R.
Effect Of Transient Temperature Conditions On The Divergence Of Activated Sludge Bacterial Community Structure and
Function. Elsevier. 41(12): 2563-2571 (2007).
- Whitehouse, C.A., Hottel, H.E. Comparison Of Five
Commercial DNA Extraction Kits For The Recovery Of Francisella tularensis DNA From Spike Soil Samples.
Molecular and Cellular Probes. 21(2): 92-96 (2007).
- Kennedy, P.G., Bruns, T.D.
Priority Effect Determine The Outcome Of Ectomycorrhizal Competition Between Two Rhizopogon
Species Colonizing Pinus muricata Seedlings.
New Phytologist. 166(2): 631-638 (2005).
- Farr, D.F., Aime, M.C., Rossman, A.Y., Palm, M.E.
Species Of Colletotrichum On Agavaceae. Science Direct. 110(pt 12): 1395-1408 (2006).
- Aime, M.C., Phillips-Mora, W. The Causal Agents Of
Witches' Broom and Frosty Pod Rot Of Cacao (Chocolate, Theobroma cacao) Form A New Lineage Of Marasmiaceae.
Mycologia. 97(5): 1012-1022 (2005).
- Lievens, B., Brouwer, M., Vanachter, A.C.R.C., Levesque, C.A., Cammue, B.P.A., Thomma, B.P.H.J.
Quantitative Assessment Of Phytopathogenic Fungi In Various
Substrates Using A DNA Macroarray. Environmental Microbiology. 7(11): 1462-2920 (2005).
- Lucero, M.E. Barrow, J.R., Osuna, P., Reyes, I.
Plant-Fungal Interactions In Arid and Semi-Arid Ecosystems: Large-Scale Impacts From Microscale Processes.
Journal of Arid Environments. 65(2): 276-284 (2005).
- Lievens, B., Brouwer, M., Vanachter, A.C., Levesque, C.A., Cammue, B.P.A., Thomma, B.P.
Design and Development Of A DNA Array For
Rapid Detection and Identification Of Multiple Tomato Vascular Wilt Pathogens.
FEMS Microbiology Letters. 223(1): 113-122 (2003).
- Desalvo, M.K., Voolstra, C.R., Sunagawa, S., Schwarz, J.A., Stillman, J.H., COffroth, M.A., Szmant, A.M., and Medina, M. Differential gene expression during thermal stress and bleaching in the Caribbean coral Montastraea faveolata. Molecular Ecology. 17: 3952-3971 (2008).
- Perreault, N.N., Andersen, D.T., Pollard, W.H., Greer, C.W., Whyte, L.G.
Characterization Of The Prokaryotic Diversity In Cold Saline
Perennial Springs Of The Canadian High Artic. Applied and Environmental Microbiology. 73(5): 1532-1543 (2007).
- Rosario, K., Iverson, S.L., Henderson, D.A., Chartrand, S., McKeon, C., Glenn, E.P., Maier, R.M.
Bacterial Community Changes During Plant Establishment At
The San Pedro River Mine Tailings Site. Journal of Environmental Quality. 36(5): 1249-1259 (2007).
- Bacchi, C.J., Rattendi, D., Faciane, E., Yarlett, N., Weiss, L.M., Frydman, B., Woster, P., Wei, B.,
Marton, L.J., Wittner, M. Polyamine Metabolism In A Member
Of The Phylum Microspora (Encephalitozoon cuniculi): Effects Of Polyamine Analogues.
Microbiology. 150: 1215-1224 (2004).
- Simpson, J.M., Santo Domingo, J.W., Reasoner, D.J.
Assessment Of Equine Fecal Contamination: The Search For Alternative Bacterial Source-Tracking Targets.
FEMS Microbiology Ecology. 47: 65-75 (2004).
- Blankenship, L.E., Yayanos, A.A. Universal Primers and PCR of Gut Contents to Study Marine Invertebrate Diets. Molecular Ecology. 14: 891-899 (2005).
- Chaverri, P., Bischoff, J.F., Evans, H.C., Hodge, K.T. Regiocrella, a New Entomopathogenic Genus with a Pycnidial Anamorph and its Phylogenetic Placement in the Clavicipitaceae. Mycologia. 97(6): 1225-1237 (2005).
- Lievens, B., Brouwer, M., Vanachter, A.C., Lévesque, C.A., Cammue, B.P., Thomma, B.P.
Quantitative Assessment Of Phytopathogenic Fungi In Various
Substrates Using A DNA Macroarray. Environmental Microbiology. 7(11): 1698-1710 (2005).
- Newby, D.T., Reed, D.W., Petzke, L.M., Igoe, A.L., Delwiche, M.E., Roberto, F.F., McKinley, J.P., Whiticar, M.J.,
Colwell, F.S. Diversity Of Methanotroph Communities
In A Basalt Aquifer. FEMS Microbiology Ecology. 48(3): 333-344 (2004).
- Vora, G.J., Meador, C.E., Stenger, D.A., Andreadis, J.D.
Nucleic Acid Amplification Strategies For DNA Microarray-Based Pathogen Detection.
Applied and Environmental Microbiology. 70(5): 3047-3054 (2004).
- Ibekwe, A.M., Grieve, C.M., Lyon, S.R.
Characterization Of Microbial Communities and Composition In Constructed Dairy Wetland Wastewater Effluent.
Applied and Environmental Microbiology. 6(9): 5060-5069 (2003).
- Lievens, B., Brouwer, M., Vanachter, A.C., Lévesque, C.A., Cammue, B.P., Thomma, B.P.
Design and Development Of A DNA Array For Rapid Detection and
Identification Of Multiple Tomato Vascular Wilt Pathogens. FEMS Microbiology Letters 223(1): 113-122 (2003).
- Ibekwe, A.M., Watt, P.M., Grieve, C.M., Sharma, V.K., Lyons, S.R.
Multiplex Fluorogenic Real-Time PCR For Detection and
Quantification Of Escherichia coli O157:H7 In Dairy Wastewater Wetlands.
Applied and Environmental Microbiology. 68(10): 4853-4862 (2002).
- Prabha, S. and Verghese, S. Existence of Proviral Porcine Endogenous Retrovirus in Fresh and Decellularised Porcine Tissues. Indian Journal of Medical Microbiology. 26(3): 228-232 (2008).
- Endara, P., Trueba, G., Solberg, O.D., Bates, S.J., Ponce, K., Cevallos, W., Matthijnssens, J., Eisenberg, J.N.
Symptomatic and Subclinical Infection With Rotavirus P[8]G9,
Rural Ecuador. Emerging Infectious Diseases. 13(4): 574-80 (2007).
- Blesa, S., Cortijo, J., Mata, M., Serrano, A., Closa, D., Santangelo, F., Estrela, J.M., Suchankova, J.,
Morcillo. E.J. Oral N-acetylcysteine Attenuates The Rat Pulmonary
Inflammatory Response To Antigen. European Respiratory Journal. 21(3): 394-400 (2003).
- Toh, S.M., Xiong, L., Bae, T., Mankin, A.S. The
Methyltransferase YfgB/RlmN Is Responsible For Modification Of Adenosine 2503 In 23S rRNA. RNA.
14(1): 98-106 (2008).
- Poulain, A.J., Ní Chadhain, S.M., Ariya, P.A., Amyot, M., Garcia, E., Campbell, P.G., Zylstra, G.J., Barkay, T.
Potential For Mercury Reduction By Microbes In The High Arctic.
Applied and Environmenal Microbiology. 73(7): 2230-2238 (2007).
- Toh, S.M., Xiong, L., Arias, C.A., Villegas, M.V., Lolans, K., Quinn, J., Mankin, A.S.
Acquisition Of A Natural Resistance Gene Renders A
Clinical Strain Of Methicillin-Resistant Staphylococcus aureus Resistant To the Synthetic Antibiotic
Linezolid. Molecular Microbiology. 64(6): 1506-1514 (2007).
- Johnson, D.R., Lee, P.K.H., Holmes, V.F., Alvarez-Cohen, L.
An Internal Reference Technique For Accurately
Quantifying Specific mRNAs By Real-Time PCR With Application To The tceA Reductive Dehalogenase Gene.
Applied and Environmetal Microbiolog. 71(7): 3866-3871 (2005).
- Bulat, S.A., Alekhina, I.A., Blot, M., Petit, J.R., de Angelis, M., Wagenbach, D., Lipenkov, V.Y., Vasilyes, L.P., Wloch, D.M., Raynaud, D., Lukin, V.V. DNA Signature of Themophilic Bacteria from the Aged Accretion Ice of Lake Vostok, Antarctica: Implications for Searching for Life in Extreme Icy Environments. International Journal of Astrobiologu. 3(1): 1-12 (2004).
- Wertz, J.T., Breznak, J.A. Physiological Ecology Of
Stenoxybacter acetivorans, An Obligate Microaerophile In Termite Guts.
Applied and Environmental Microbiology. 73(21): 6829-6841 (2007).
- Wilkie, D.C., Van Kessel, A.G., Dumonceaux, T.J., Drew, M.D.
The Effect Of Hen-Egg Antibodies On Clostridium perfringens Colonization In The Gastrointestinal Tract Of
Broiler Chickens. Preventive Veterinary Medicine. 74(4): 279-292 (2005).
- Dumonceaux, T.J., Hill, J.E., Briggs, S.A., Amoakoa, K.K., Hemingsen, S.M., Van Kesse, A.G.
Enumeration Of Specific Bacterial Populations
In Complex Intestinal Communities Using Quantitative PCR Based On The Chaperonin-60 Target.
Journal of Microbiological Methods. 64(1): 46-62 (2006).
- Ishii, S., Loynachan, T.E.
Rapid and Reliable DNA Extraction Techniques From Trypan-Blue-Stained Mycorrhizal Roots: Comparison Of Two Methods.
Mycorrhiza. 14(4): 271-275 (2004).
- Krajmalnik-Brown, R., Hölscher, T., Thomson, I.N., Saunders, F.M., Ritalahti, K.M.,
Löffler, F.E. Genetic Identification Of A Putative Vinyl Chloride
Reductase In Dehalococcoides sp. Strain BAV1. Applied and Environmental Microbiology.
70(10): 6347-6351 (2004).
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